Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0914 ATGCACGTACAAGCAAGCCCACGGCACCACCGGATCTTTGTTGAATTTTGTGCTTTAACCTGTTTGTGGCTATCTTTCTCATCAACCTTGGTTCTGAGGGACTGCCACATCCAGTTCAACCACGGGCCTGCCTTTGTAAGGATGGTTAGGGTCAGTGTATTGAATGATGCATTAAAGAGCATGTACAATGCTGAGAAGAGAGGAAAGCGGCAAGTCATGATAAGACCTTCTTCTAAGGTTATCATCAAGTTTCTTCTGGTCATGCAGAAGCATGGTTACATTGGTGAGTTTGAGTATGTTGATGATCATAGAGCTGGAAAAATTGTTGTTGAACTTAATGGAAGGTTGAACAAGTGTGGAGTTATCAGCCCTCGTTTTGATGTTGGTGTCAAAGAAATTGAGCCATGGACAGCTAGGCTGCTTCCTTCCAGACAGTTTGGATATATTGTTTTGACAACTTCTGCGGGCATCATGGACCATGAAGAAGCTAGGAGGAAAAATGTCGGTGGAAAGGTTCTTGGTTTCTTTTACTAG 534 0.4326 MHVQASPRHHRIFVEFCALTCLWLSFSSTLVLRDCHIQFNHGPAFVRMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0914 177 FunFam 40S ribosomal protein S15a 117 177 - -
Dere02g0914 177 SUPERFAMILY Ribosomal protein S8 51 177 IPR035987 GO:0003735|GO:0005840|GO:0006412
Dere02g0914 177 ProSitePatterns Ribosomal protein S8 signature. 147 164 IPR000630 GO:0003735|GO:0005840|GO:0006412
Dere02g0914 177 Gene3D - 117 177 - -
Dere02g0914 177 FunFam 40S ribosomal protein S15a 48 116 - -
Dere02g0914 177 PANTHER 40S RIBOSOMAL PROTEIN S15A 48 176 IPR000630 GO:0003735|GO:0005840|GO:0006412
Dere02g0914 177 Hamap 30S ribosomal protein S8 [rpsH]. 49 177 IPR000630 GO:0003735|GO:0005840|GO:0006412
Dere02g0914 177 Pfam Ribosomal protein S8 54 177 IPR000630 GO:0003735|GO:0005840|GO:0006412
Dere02g0914 177 Gene3D - 48 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0914 Dere-ChrDere02 8745926 8748937 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0914 48 177 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.923 1.02e-91 261