Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0908 ATGGCTTTCCTCTCTGGAATTCGGCGCCTTCTTAGCGAGTCCTCTGCTACTTCCTCGTTTCTTCACTCTCGCTTTACTTCGATCCGCCTCAGTTCAACTCTCACATCCCCCAAGCTTTTCGTTAGCGGTCTTTCGAGACTGACAACAGATGAAAAATTAAAGGAAGCATTTGCTCCTTTTGGGCAGCTGGTGGAAGCTAAGGTCATAACTGATAGAATCTCTGGAAGATCGAAGGGATTTGCTTTTGTAACCTATGCAACAATGGAAGAGGCTGAAAGAGCCAGAGAAGGAATGAATGCCAAGTTTTTGGATGGATGGGTTATATTTGTGGACCCTGCCAAACCAAGAGAACCCAAACCTCCCCAGCAATCACAGCCTCAGCCCTCTGAAACCGGGTTCACAGTGAACAAGACAATTGGATGGTCTGGTTGA 432 0.4699 MAFLSGIRRLLSESSATSSFLHSRFTSIRLSSTLTSPKLFVSGLSRLTTDEKLKEAFAPFGQLVEAKVITDRISGRSKGFAFVTYATMEEAERAREGMNAKFLDGWVIFVDPAKPREPKPPQQSQPQPSETGFTVNKTIGWSG 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0908 143 Gene3D - 14 127 IPR012677 -
Dere02g0908 143 PANTHER NUCLEOLAR PROTEIN 8 18 142 - -
Dere02g0908 143 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 37 115 IPR000504 GO:0003723
Dere02g0908 143 SUPERFAMILY RNA-binding domain, RBD 36 133 IPR035979 GO:0003676
Dere02g0908 143 MobiDBLite consensus disorder prediction 113 143 - -
Dere02g0908 143 MobiDBLite consensus disorder prediction 126 143 - -
Dere02g0908 143 FunFam RNA binding protein 24 137 - -
Dere02g0908 143 SMART rrm1_1 38 111 IPR000504 GO:0003723
Dere02g0908 143 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 39 105 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0908 Dere-ChrDere02 8702047 8703357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0908 38 119 Eukaryotic Initiation Factors Gene Family AT1G49760 41.463 5.63e-12 60.1