Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0873 ATGGTTGCCGCTGCCAATCCTGTCGTTGGGTCCCATGTTTGGGTAGAGGATCTTGACGTAGCTTGGATAGATGGTGAGGTTTTGGAGGTTAAGGGAGAGGAAATCAAAGTCCTTTGCACTTCGGGGAAGACAGTGGTTGTTAAAGCTTCCAGTATTCATCCTAAAGATACTGAGGTGCCACCATGTGGAGTGGATGATATGACAAAGCTCGCTTATCTGCATGAACCTGGAGTCCTGGATAACCTGAGATCAAGATATGATATTAATGAAATTTATACTTACACTGGGAATATATTGATTGCTGTGAACCCTTTTGCAAAACTTCCTCATTTATATGATAGCCATATGATGGCACAATATAAAGGGGCAGCTTTTGGTGAGCTGAGTCCGCATCCCTTTGCTGTTGCAGATGCTGCATATAGGCTTATGGTTAATGAAGGAATCAGCCAATCAATATTGGTCAGTGGTGAAAGTGGGGCTGGGAAAACAGAAAGCACTAAATTATTAATGCGTTATCTTGCTTACATGGGAGGGAGAGCTGCTGCTGAAGGTAGGACTGTTGAGCAGAAAGTCCTGGAGTCTAATCCTGTTTTAGAAGCCTTTGGCAATGCAAAGACTGTTAGGAACAATAATTCAAGTCGTTTTGGTAAATTTGTGGAGATTCAATTTGACCAGATGGGGAGAATTTCAGGAGCTGCTATAAGAACTTATCTTCTAGAAAGATCACGTGTTTGCCAGGTGTCAGATCCAGAGAGGAATTATCACTGTTTTTACATGCTCTGTGCTGCACCTCCTGAGGAAGTTCAGAAGTACAAATTGGGAAAGGCAGCAACGTTTCATTATCTGAATCAATCAAATTGCTATGAGTTAGAAGGGCTTGATGAATCTAAAGAATATATTGCAACAAGGAGAGCAATGGATGTTGTTGGAATAAGTTCTCAAGAGCAGGATGCTATATTTCGAGTGGTGGCTGCAATTTTGCACCTTGGAAACATTGAATTTGCCAAAGGGAAGGAAATAGACTCATCTATGCCCAAGGATGAAAAATCTAGGTTCCATCTACAAACTGCTGCTGAGCTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAGCGTATAATTGTTACTCGTGATGAAACAATTATAAAATGTTTGGATCCAGAAGCTGCTGCACTCAGCCGAGATGCTTTGGCTAAAATTGTGTACTCGAGGTTGTTTGACTGGCTAGTAGAAAAAATCAACAGTTCAATTGGTCAAGATCCTGAGTCAAAGTCCTTAATTGGAGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTCTGTATTAATTTGACAAATGAAAAGCTTCAGCAACATTTTAATCAGCACGTTTTTAAAATGGAGCAAGAAGAATACAAAAAAGAGGAGATTGATTGGAGTTACATTGAATTTGTTGACAATCAAGATATTCTGGATCTCATTGAAAAGAAACCAGGCGGCATTATTGCTCTTCTGGATGAAGCTTGTATGTTTCCTAGATCAACACATGAAACTTTTGCCCAAAAGCTGTATCAGACATTCAAGAACCATAAAAGGTTCAGCAAACCCAAATTATCGCGTAGTGACTTCACAATATGCCATTATGCTGGTGATGTCACTTATCAAACTGAATTGTTCCTGGACAAGAACAAAGATTATGTTGTTGCGGAACATCAGGCACTTCTTTGTGCTTCAAAATGCCCCTTTGTATCGGGTTTGTTTCCCCCCTCACCTGAGGAATCATCCAAACAATCAAAGTTCTCTTCAATAGGTTCTCGATTTAAGCAACAATTGCAATCACTACTTGAAACTCTCAGTGCCTCTGAGCCACATTATATTCGTTGTGTAAAACCCAATAATTTGCTTAAGCCAGCAATCTTTGAGAACAAAAATGTTTTGCAGCAACTGCGTTGTGGGGGAGTTATGGAGGCAATACGGATTAGCTGTGCTGGATATCCCACTAGAAAAACCTTTGATGAATTTGTGGATAGATTTGGTCTTCTTGCACCTGAAGCTTTGGATGGAAGTTCTGATGAGATCACTGCTTGCAAGAGGATTCTAGAGAAGGTTGGACTTCAAGGCTACCAGATTGGTAAAACAAAGGTGTTTCTTCGAGCTGGTCAAATGGCAGAACTTGATACTCGTAGGAGTGAGATCTTGGGAAAGTCGGCAAGCATAATTCAGAGGAAAGTTCGTTCCTATTTGGCCCGTCGAAGTTTTGTTTTGCTTCGTTTCTCTGCTATACAGATTCAAGCTGCATGCAGAGGACAACTTGCTCGGCATATGTTTGAAGGAAAGCGGCGGGAGGCTTCTAGCTTGATGATTCAGAAGTATTTCCGCATGCATATTGCTAGAAAGGCATACAAAGAATTGTATACCTCTGCTATTTCTGTTCAGACTGGTATGCGCGGGATGATTGCTCGTTCTGAGCTACGCTTTAGGAGGCAGACCAGAGCAGCAATTGTTATACAGAGCCATATCCGGAAGTATTTGGCACAACATCATTTTATGGACTTGAAGAAAGCAGTAATTGCAACACAGTGTGCATGGAGAGGAAGAGTTGCTCGGCGTGAATTACGAAAGCTCAAGATGGCTGCAAGGGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTTGAAGATCTTTCATTGAGGTTGCAGCTGGAGAAGCGATTGAGGGTTGACATGGAAGAAGCAAAAACACAAGAAAATGAAAGATTACAATCTGCTTTGCAAGCGATGCAACTTCAGTTTAAAGAGACTAAAGTTCTGCTTGAAAAGGAGCGTGAGGCTGCAAAAAGGGCAGCCGAGAGAGCTCCTGTTGTACAGGAGGTTCCAGTTGTTGATAATGTTTTGTTAGAGAAGCTCACTGGTGAAAATGAGAAGCTCAAGACCTTGGTGAATTCGCTGGAAAAGAAAATTGATGAAACTGAAAAAAGGTTTGAAGAGGCAAACAAAATTAGTGAAGAAAGATTGAAGCAAGCCTTGGAGGCAGAATCAAAGATAATCCAGTTGAAGACTGCTATGCAAACGCTTGAAGAGAAATTCTCAGATGTTGAATCCGAAAACCAGATTCTTCGGCAACAATCTTTGCTAAACTCGAATGTGAAAAAAATGTCAGAGCACCTCTCAACCCCTTCAGATGAGAAGTTGGAAAATGGTCATCATGCCGTGGAAGAGCATAAAGCTCTTGAAACACATAGTCTTACAACACCAGTAAAAAAGTTTGGTACAGAATCTGATAGCAAATTAAGGAGATCATACATTGAACGCCAGCATGAGAATGTTGATGCACTAATCAACTGTGTTAGAAAAAATATTGGGTTCAATCATGGAAAGCCTGTTGCTGCATTTACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAGAGGACAAGTGTATTTGATCGCCTCATCCAGATGATTGGTTCTGCAATTGAGAATCAAGATGACAATGATCTTATGGCTTATTGGCTGTCAAATACTTCTGCATTACTGTTTTTGCTTCAACAAAGTCTGAAATCTGGGGCTACAAGTGATGCAACTCCAGTTAAAAAACCACCAAATCCGACATCCCTCTTCGGAAGAATGACTATGGGTTTTCGTTCATCCCCTTCGGCGGCCTACCTTGCTGCCCCATTGGACGTTGTATGCAAGGTGGAGGCTAAATACCCCGCGTTGCTTTTTAAACAGCAGCTCACAGCATATGTGGAGAAAATCTATGGTATCATTCGGGACAACTTGAAAAAGGAGTTAACTTCGTTCCTTTCATTATGTATCCAGGCACCGAGAACGGTAAAGGGAGTGTTACGCACTGGCCGATCATTTGGTAAAGATTCTCCAATGGGTCACTGGCAGAGTATTATAGAATCCCTCAACACCCTCCTCTGTGCACTGAAGGAGAACTTTGTTCCTCCAGTACTCATCCAAAAGATCTTTACTCAAACATTCTCATATATTAATGTTCAACTCTTCAACAGTCTTCTTCTCCGCCGAGATTGTTGCACATTCAGCAATGGGGAATATGTAAAAGCTGGATTAGCAGAATTGGAGCTATGGTGCTGCCAAGCAAAGGAGGAGTATGCTGGGTCGTCTTGGGATGAACTTAAGCACATAAGACAGGCTGTTGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCGTATGATGAAATTACCAATGATTTGTGCCCTATCCTGAGTGTCCAGCAGCTGTATAGAATATGTACACTCTACTGGGATGCTAATTATAACACTCGAAGTGTATCTCCAGATGTCCTTTCAAGCATGAGGGTGCTTATGGCTGAGGACTCCAATAATGCTCAGAGTGATTCTTTCTTGTTGGATGACAATTCCAGTATTCCTTTCTCAGTGGATGACCTCTCTACATCACTGCAAGAGAAGGAATTCTCAGACATGAAAGCCGCAGATGAACTTCTTGAGAATCCAGCCTTTCAGTTTTTAAACGAGTAG 4539 0.4133 MVAAANPVVGSHVWVEDLDVAWIDGEVLEVKGEEIKVLCTSGKTVVVKASSIHPKDTEVPPCGVDDMTKLAYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFAKLPHLYDSHMMAQYKGAAFGELSPHPFAVADAAYRLMVNEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQMGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEEVQKYKLGKAATFHYLNQSNCYELEGLDESKEYIATRRAMDVVGISSQEQDAIFRVVAAILHLGNIEFAKGKEIDSSMPKDEKSRFHLQTAAELFMCDAKALEDSLCKRIIVTRDETIIKCLDPEAAALSRDALAKIVYSRLFDWLVEKINSSIGQDPESKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLSRSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLCASKCPFVSGLFPPSPEESSKQSKFSSIGSRFKQQLQSLLETLSASEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFGLLAPEALDGSSDEITACKRILEKVGLQGYQIGKTKVFLRAGQMAELDTRRSEILGKSASIIQRKVRSYLARRSFVLLRFSAIQIQAACRGQLARHMFEGKRREASSLMIQKYFRMHIARKAYKELYTSAISVQTGMRGMIARSELRFRRQTRAAIVIQSHIRKYLAQHHFMDLKKAVIATQCAWRGRVARRELRKLKMAARETGALQAAKNKLEKQVEDLSLRLQLEKRLRVDMEEAKTQENERLQSALQAMQLQFKETKVLLEKEREAAKRAAERAPVVQEVPVVDNVLLEKLTGENEKLKTLVNSLEKKIDETEKRFEEANKISEERLKQALEAESKIIQLKTAMQTLEEKFSDVESENQILRQQSLLNSNVKKMSEHLSTPSDEKLENGHHAVEEHKALETHSLTTPVKKFGTESDSKLRRSYIERQHENVDALINCVRKNIGFNHGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENQDDNDLMAYWLSNTSALLFLLQQSLKSGATSDATPVKKPPNPTSLFGRMTMGFRSSPSAAYLAAPLDVVCKVEAKYPALLFKQQLTAYVEKIYGIIRDNLKKELTSFLSLCIQAPRTVKGVLRTGRSFGKDSPMGHWQSIIESLNTLLCALKENFVPPVLIQKIFTQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDANYNTRSVSPDVLSSMRVLMAEDSNNAQSDSFLLDDNSSIPFSVDDLSTSLQEKEFSDMKAADELLENPAFQFLNE 1512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0873 1512 Gene3D - 833 882 - -
Dere02g0873 1512 Gene3D - 735 783 - -
Dere02g0873 1512 Gene3D - 784 832 - -
Dere02g0873 1512 FunFam Myosin heavy chain 252 307 - -
Dere02g0873 1512 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere02g0873 1512 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere02g0873 1512 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere02g0873 1512 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere02g0873 1512 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere02g0873 1512 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Dere02g0873 1512 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Dere02g0873 1512 CDD MYSc_Myo11 76 720 IPR036018 -
Dere02g0873 1512 FunFam Myosin 2 312 430 - -
Dere02g0873 1512 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Dere02g0873 1512 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Dere02g0873 1512 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere02g0873 1512 ProSiteProfiles IQ motif profile. 737 759 IPR000048 GO:0005515
Dere02g0873 1512 Gene3D - 666 733 - -
Dere02g0873 1512 FunFam Class V myosin 439 578 - -
Dere02g0873 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 786 883 IPR027417 -
Dere02g0873 1512 Gene3D Kinesin motor domain 65 662 IPR036961 -
Dere02g0873 1512 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Dere02g0873 1512 FunFam Myosin XI D 735 784 - -
Dere02g0873 1512 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Dere02g0873 1512 Pfam Myosin N-terminal SH3-like domain 10 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Dere02g0873 1512 SMART iq_5 757 779 IPR000048 GO:0005515
Dere02g0873 1512 SMART iq_5 830 852 IPR000048 GO:0005515
Dere02g0873 1512 SMART iq_5 805 827 IPR000048 GO:0005515
Dere02g0873 1512 SMART iq_5 734 756 IPR000048 GO:0005515
Dere02g0873 1512 SMART iq_5 782 804 IPR000048 GO:0005515
Dere02g0873 1512 SMART iq_5 853 875 IPR000048 GO:0005515
Dere02g0873 1512 Gene3D - 252 310 - -
Dere02g0873 1512 SMART DIL_2 1333 1440 IPR002710 -
Dere02g0873 1512 Pfam DIL domain 1334 1437 IPR002710 -
Dere02g0873 1512 ProSiteProfiles IQ motif profile. 831 860 IPR000048 GO:0005515
Dere02g0873 1512 CDD MyosinXI_CBD 1109 1481 IPR037975 GO:0007015
Dere02g0873 1512 FunFam unconventional myosin-Va 785 833 - -
Dere02g0873 1512 Gene3D - 439 623 - -
Dere02g0873 1512 PANTHER MYOSIN 54 1446 - -
Dere02g0873 1512 SMART MYSc_2a 57 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere02g0873 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 784 IPR027417 -
Dere02g0873 1512 ProSiteProfiles Dilute domain profile. 1158 1458 IPR002710 -
Dere02g0873 1512 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dere02g0873 1512 FunFam unconventional myosin-Va 834 881 - -
Dere02g0873 1512 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Dere02g0873 1512 Pfam IQ calmodulin-binding motif 786 804 IPR000048 GO:0005515
Dere02g0873 1512 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Dere02g0873 1512 Pfam IQ calmodulin-binding motif 761 775 IPR000048 GO:0005515
Dere02g0873 1512 Pfam IQ calmodulin-binding motif 832 851 IPR000048 GO:0005515
Dere02g0873 1512 Coils Coil 877 936 - -
Dere02g0873 1512 Coils Coil 972 1048 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0873 Dere-ChrDere02 8278651 8297245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0873 1 1511 Myosins gene family AT5G43900 75.478 0.0 2351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3033 01 44822281 44848929 Dere02g0873 02 8278651 8297245 CCT
Dere02g0268 02 2681279 2694727 Dere02g0873 02 8278651 8297245 CCT
Dere02g0873 02 8278651 8297245 Dere02g0873 02 8278651 8297245 ECH