Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0868 ATGCCAACTTTAGTTGTCTTCCTCCTTGTTCTTCTTAATTTGCTTTTCTCTTGCTCAGGTTATTTCTCCTTGTCAACATTTGTGTCTCCTTCTTCAATGCCATACCAGCCTTTGTCTGTCAGAGACATGTTAGTTAAGCATGTGAAGTCAGTTTCTACTAGTGCATCATTTGCCTCATCAAAACCAGCCAGAACTTGGTTGGCTAAGCCTTCTCTAGGACCATCTTCAGCACCTGCGCCATCTCCATATATCCAAGGTCCCAGTGTGAATCCAAGACCAAGACATCATCATCGCCGTCATCACCACCGTGGTGTGAGACCTCATGTAGTAGTAGCTCCATCCCCTTCTAATGATCAAGGTTGTGACCAAATCTGTATGGAGCCGCTCACAGCAACTCCCTTTGGTTCACCTTGTGGCTGTGTATTTCCCATGAAAGTCAGACTTATGCTGGATGTTGCTCCTTATGCAGTTTTTCCAGTAATGAATGAGTTAGAGATTGAGGTTGCATCAGGCACATATTTGGAACAGAGCCAGGTGAAGATAATGGGTGCAAATGCTGACAGTGAAAATCAAGGAAGAACTGTAGTTGATATCAACTTGGTTCCACTGGGAGAGAAGTTTGACAACACCACTGCAGTTCTGATATATGAGAGGTTTTGGCATAAGAAAATTCCTCTAAATGGGAGCCTTTTTGGTGATTATGCAGTCATGTACATCAGTTATCCAGGGATTCCATCATCGCCGCCACATGGAAGCTATGTTGGGAGTGGTCCCAGTGGGAATGCTGGTAATCTTCCAATCACTGCCAACTTTGTCAGCAAGAACCAGAAAATGAATTTCAGAACCATAATCATCATTGCTTTATCTGCCTTTGTACTCTTGTTGGTTTTGGTTGGAGCGTTTTCCATCCTTTTGAAATGGAGGAGGAGTGGGGGACCATCTAGTGCTGTTGGTCCTGCATTTACATCATCTATAAATAAGCGATCTGGCATGGGGTCTATGTTGTCAAGCAGTATTACAAGCTCAACATCAGTGTCCCTTCTGTCCACCATGGCCACTTCTATTCTCTCTGTTAGAACATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAAGTTCAGTTCAAAGAGAGTACTAGGAGAAGGGGGATTTGGACGTGTTTATAGTGGGACATTGGATGATGGAACTGAAGTTGCCGTTAAGCTCCTCACAAGGGATAATCAGAATGGAGACCGTGAATTTATTGCAGAAGTTGAGATGCTAAGCCGCTTGCATCACCGTAATCTGGTGAAACTCATTGGTATATGCATTGAAGGGCGCAGACGTTGCTTGGTGTATGAGCTAGTTCACAATGGCAGTGTTGAGTCCCATTTGCATGGTGTTGACAAGAAGAAGGGGCCTCTGGAATGGGAAGCAAGGATGAAAATTGCTCTTGGAGCTGCGAGAGGATTGGCCTATCTTCATGAGGATTCTAATCCTCGTGTAATTCATCGAGACTTTAAAGCTAGTAATGTGTTATTAGAAGATGACTTCACCCCCAAGGTTTCTGATTTTGGCTTGGCAAGAGAAGCAACTGAAGGAAGTCATCATATTTCTACACGTGTCATGGGAACTTTTGGGTATGTGGCCCCAGAATATGCAATGACAGGCCATTTACTTGTTAAAAGTGATGTTTATAGCTATGGCGTAGTGCTGCTTGAACTTCTTAGCGGCAGAAAGCCAGTGGACATGTCTCAACCTCAGGGACAAGAGAATCTAGTGACATGGGCAAGGCCACTCTTGACGAGTAGAGAAGGTGTAGAACAGCTAGTGGATCCATATTTGGCTGGAAGTTATGACTTTGATGACATGGCGAAGGTGGCTGCCATTGCTTCAATGTGTGTCCACCCCGAGGTCACTCACAGACCTTTCATGGGTGAAGTTGTGCAGGCTCTAAAGTTGATATACAATGACACGGATGAGACTTGTGGGGATTGCTGTAGTCAGAAGGAATCTTCTGCTCAGGAATCTGACATTAGAGGCGATCTTGCTCCTTCAGATAGCAGCTGGTGGAATGCTGGAGGGGTAACCCCACGATTAACGTATGGTCAAGCATCTTCCTTCATCACAATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAAAACAGACCGTTTTCAACTTCAAGCTTGATCGGAGACGAGGTATCTTTACCAATTAAGCATGGGAATAGGTCAGGTCCCCTAAGAACAGTCCGAAGCAAGTTATCTTTGTATAGATTTACTGGAAGTCGGAGTGAACATGGGGGCCTTCCTTCCAAGCGTGTTTCAAACGATGGTTACTGGGTTTAA 2331 0.4449 MPTLVVFLLVLLNLLFSCSGYFSLSTFVSPSSMPYQPLSVRDMLVKHVKSVSTSASFASSKPARTWLAKPSLGPSSAPAPSPYIQGPSVNPRPRHHHRRHHHRGVRPHVVVAPSPSNDQGCDQICMEPLTATPFGSPCGCVFPMKVRLMLDVAPYAVFPVMNELEIEVASGTYLEQSQVKIMGANADSENQGRTVVDINLVPLGEKFDNTTAVLIYERFWHKKIPLNGSLFGDYAVMYISYPGIPSSPPHGSYVGSGPSGNAGNLPITANFVSKNQKMNFRTIIIIALSAFVLLLVLVGAFSILLKWRRSGGPSSAVGPAFTSSINKRSGMGSMLSSSITSSTSVSLLSTMATSILSVRTFSLSELEKATDKFSSKRVLGEGGFGRVYSGTLDDGTEVAVKLLTRDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVHNGSVESHLHGVDKKKGPLEWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDMSQPQGQENLVTWARPLLTSREGVEQLVDPYLAGSYDFDDMAKVAAIASMCVHPEVTHRPFMGEVVQALKLIYNDTDETCGDCCSQKESSAQESDIRGDLAPSDSSWWNAGGVTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLIGDEVSLPIKHGNRSGPLRTVRSKLSLYRFTGSRSEHGGLPSKRVSNDGYWV 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0868 776 CDD STKc_IRAK 379 648 - -
Dere02g0868 776 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Dere02g0868 776 FunFam Receptor-like serine/threonine-protein kinase ALE2 449 667 - -
Dere02g0868 776 PANTHER OS01G0750732 PROTEIN 113 669 - -
Dere02g0868 776 SUPERFAMILY Protein kinase-like (PK-like) 352 648 IPR011009 -
Dere02g0868 776 ProSitePatterns Protein kinases ATP-binding region signature. 379 401 IPR017441 GO:0005524
Dere02g0868 776 Gene3D Phosphorylase Kinase; domain 1 345 448 - -
Dere02g0868 776 MobiDBLite consensus disorder prediction 68 104 - -
Dere02g0868 776 ProSiteProfiles Protein kinase domain profile. 373 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0868 776 Pfam Protein tyrosine and serine/threonine kinase 375 644 IPR001245 GO:0004672|GO:0006468
Dere02g0868 776 Gene3D Transferase(Phosphotransferase) domain 1 449 671 - -
Dere02g0868 776 FunFam receptor-like serine/threonine-protein kinase ALE2 346 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0868 Dere-ChrDere02 8241402 8247572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0868 117 762 Receptor kinase-like Gene Family AT5G56890 53.916 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Dere02g0868 PK_Tyr_Ser-Thr 6e-48 CL0016