Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0865 ATGGACCCTAACGTGAAATTATCTGGCTGTCTGTTTCTGTGTCTGAGCTTTGTGGTTCCGATCTCGTCCATGGCTACTCAGGGTCATGTCATTACCTGCAAAGCTGCGGTGGCCTGGGAACCCAACAAACCATTGACCATCGAAGACGTTCAGGTGGCTCCGCCGCAGGCTGGGGAGGTCCGAGTCAAGATTCTCTATACTGCTCTTTGTCACACCGATGCTTACACCTGGAGCGGCAAGGATCCAGAAGGTCTCTTTCCGTGTATTCTTGGACATGAAGCAGCTGGGATTGTAGAAAGTGTTGGAGAAGGTGTTACAGAAGTTCAGCCTGGAGATCATGTCATCCCCTGTTACCAGGCTGAATGTCGAGAATGCAAGTTTTGCAAATCAGGCAAAACAAACCTCTGTGGCAAAGTTCGTGCTGCCACGGGAGTTGGGGTCATGCTGAGTGATCGCAAGAGTCGTTTCTCTATTAATGGGAAGCCCATCTATCATTTTATGGGAACCTCAACTTTTAGTCAATACACAGTTGTTCATGACGTTAGTGTAGCTAAGATTGATCCAAAAGCGCCTTTAGAAAAAGTTTGTCTTCTTGGATGCGGCGTTCCGACTGGCCTTGGAGCTGTCTGGAACACTGCAAAGGTAGAACCAGGATCAATTGTAGCTATTTTTGGTCTTGGAACTGTTGGGCTTGCTGTCGCAGAGGGTGCAAAAGCTGCTGGTGCATCACGGATCATTGGCATAGACATTGACAGCAAAAAGTTTGAAATAGCAAAGAACTTTGGCGTCACTGAATTCATTAATCCAAATGACTACGAGAAACCGATTCAGCAGGTCATAGTTGATCTCACCGATGGTGGAGTTGATTATAGTTTTGAGTGCATTGGTAATGTCTCAGTGATGAGGGCTGCTTTGGAATGCTGTCATAAGGGCTGGGGGACATCAGTTATTGTGGGTGTTGCAGCGTCAGGGCAAGAAATATCAACTCGCCCTTTCCAGTTGGTGACTGGTCGTGTTTGGAAAGGAACAGCTTTTGGTGGCTTCAAGAGCCGATCACAAGTGCCTTTGCTTGTAGACAAGTACTTGAAGAAGGAAATCAAGATTGATGAGTACATTACCCACAATTTAACTCTTACGGAGATCAACAAGGCTTTTGATCTCATGCATGAAGGGGGATGCCTCCGTTGTGTGCTTGCAGTGGATGTTTGA 1209 0.4682 MDPNVKLSGCLFLCLSFVVPISSMATQGHVITCKAAVAWEPNKPLTIEDVQVAPPQAGEVRVKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMLSDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVPTGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFEIAKNFGVTEFINPNDYEKPIQQVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPLLVDKYLKKEIKIDEYITHNLTLTEINKAFDLMHEGGCLRCVLAVDV 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0865 402 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 191 364 IPR036291 -
Dere02g0865 402 NCBIfam S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 33 399 IPR014183 GO:0006069|GO:0008270|GO:0051903
Dere02g0865 402 PANTHER ALCOHOL DEHYDROGENASE 29 398 - -
Dere02g0865 402 FunFam S-(hydroxymethyl)glutathione dehydrogenase 205 343 - -
Dere02g0865 402 Gene3D - 36 395 - -
Dere02g0865 402 Pfam Alcohol dehydrogenase GroES-like domain 58 185 IPR013154 -
Dere02g0865 402 FunFam S-(hydroxymethyl)glutathione dehydrogenase 36 223 - -
Dere02g0865 402 SUPERFAMILY GroES-like 26 220 IPR011032 -
Dere02g0865 402 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 91 105 IPR002328 GO:0008270|GO:0016491
Dere02g0865 402 Gene3D - 205 343 - -
Dere02g0865 402 CDD alcohol_DH_class_III 31 398 IPR014183 GO:0006069|GO:0008270|GO:0051903
Dere02g0865 402 Pfam Zinc-binding dehydrogenase 229 350 IPR013149 -
Dere02g0865 402 SUPERFAMILY GroES-like 349 398 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0865 Dere-ChrDere02 8217847 8221494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0865 33 354 Monolignol Biosynthesis Gene Families AT1G72680 27.217 3.66e-17 80.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g0865 02 8217847 8221494 Dere02g0865 02 8217847 8221494 ECH