Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0864 ATGACAACTCTCTCGTGCTCCGCCGCTGATCTCCACTCTCTTCTTGCTGAGACAAGCAATTCTTCCGCCGCCGCTGAATATATTTGTCAACGTTTCGAAGCGATTTCGAAAAAATTTGTTGATACTTCCTATGCTGTGGATAACACCTACCTTCTCTTTTCTGCCTACCTCGTGTTTGCGATGCAGCTAGGCTTTGCCATGCTCTGTGCTGGATCTGTGCGAGCCAAGAACACCATGAACATTATGCTCACCAATGTGCTTGACGCTGCGACTGGTGGCATTTTCTATTACATTTTCGGGTTTGCTTTGTCTTATGGGTCACCATCAAATGGGTTGATCGGGCAACACTTCTTCGGCCTGGAGAAATTCCCTGCTCCATCTTTTGATTATGGGTATTTTCTCTACCAATGGGCTTTTGCCATTGCGGCCGCTGGAATCACCAGTGGTTCGATTGCAGAGAGAACCCAGTTCGTCGCCTATTTGATTTACTCATCCTTCCTAACGGGGTTGATTTATCCCATAGTCTCTCACTGGTTCTGGTCTGCGGATGGCTGGGGTAGCCCTGCTCGCTCTGAAAATCTCTTATTCGGATCTGGGGTCATCGATTTCGCCGGCTCCGGCGTCGTTCACTTGGTCGGCGCCGTCGCCGGCTTCTGGGGTGCCTTTATCGAAGGCCCTCGTATAGGCAGATTCGACCACGAAGGAAAAGCTGTAGTCATGCGAGGACACAGTGGAACCTTGGTTGTTTTAGGCACATTCCTGCTATGGTTTGGATGGTACGGATTCAACCCGGGATCCTTCATTACCATCTTGAAGGCCTATAATGGTTCAGGTTCTTACTACGGGCAATGGAGTGCCATTGGTAGAACCGCAGTGACCACAACGCTTGCTGGTTGCTCGGCAGCACTGACCACTCTTTTTGGTAAACGAATTCTGAGTGGACATTGGAATGTCACAGATGTTTGCAATGGGTTGCTCGGTGGGTTCGCAGCAATAACCGCAGGGTGCTCTGTGGTTGACTCATGGGCTGCAATCGTATGTGGGTTTGTGGCCGCTTGGGTGCTCATTGGATGCAACATGTTAGCAGAAAAAGTGAAGTACGATGATCCATTGGAGGCAGCTCAGCTTCATGGAGGTTGTGGGTCGTGGGGCATAATCTTCACAGCACTATTTGCTGAGAAACAGTACGTGAATGAGCTGTACCCTGGAGTTCCCGATAGGCCCTTTGGCTTGCTCGTTGGAGGAGGATGGAAGCTATTGGCAGCACATGTTGTTCAGATTTTGGTTATCATAGCCTGGGTGAGTGTTACCATGGGAACACTGTTCTTCTTGCTTCATAAGTTGCAGCTTCTGAGGATCTCACCTGACGACGAAATGGCTGGATTGGATGTTACTAGCCATGGTGGATTGGCTTATGCGTACAGCGAGGAGGTGGAGTTACATAAAAAACGTGTGCATGGGGCTACCAAGTCCAAGATGGATTCTTCGCCTGTTTGA 1497 0.4957 MTTLSCSAADLHSLLAETSNSSAAAEYICQRFEAISKKFVDTSYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFYYIFGFALSYGSPSNGLIGQHFFGLEKFPAPSFDYGYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGLIYPIVSHWFWSADGWGSPARSENLLFGSGVIDFAGSGVVHLVGAVAGFWGAFIEGPRIGRFDHEGKAVVMRGHSGTLVVLGTFLLWFGWYGFNPGSFITILKAYNGSGSYYGQWSAIGRTAVTTTLAGCSAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVDSWAAIVCGFVAAWVLIGCNMLAEKVKYDDPLEAAQLHGGCGSWGIIFTALFAEKQYVNELYPGVPDRPFGLLVGGGWKLLAAHVVQILVIIAWVSVTMGTLFFLLHKLQLLRISPDDEMAGLDVTSHGGLAYAYSEEVELHKKRVHGATKSKMDSSPV 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0864 498 Pfam Ammonium Transporter Family 50 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Dere02g0864 498 ProSitePatterns Ammonium transporters signature. 202 227 IPR018047 GO:0008519|GO:0016020|GO:0072488
Dere02g0864 498 NCBIfam ammonium transporter 47 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Dere02g0864 498 PANTHER AMMONIUM TRANSPORTER 17 468 - -
Dere02g0864 498 Gene3D Ammonium transporter AmtB like domains 25 491 IPR029020 -
Dere02g0864 498 FunFam Ammonium transporter 28 487 - -
Dere02g0864 498 SUPERFAMILY Ammonium transporter 44 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0864 Dere-ChrDere02 8214982 8216478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0864 2 493 Inorganic Solute Cotransporters AT4G28700 75.449 0.0 748