Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0863 ATGGCGCTGTGGATGGAACAGGGTTCTGAGCCCTTGACCGAAACCGAGAAAGCAGACCTTGATGCTATTGCTGCAGTTAAAGAGTCCGCTGCAATAGAACTTAAGGAAAAGGGCAATCAATATGTCAAAATGGGTAAAAAGCATTATTCTGATGCTATTGATTGTTACACAAGGGCAATAAACCAAAAAGCCTTAAGTGACTCTGAGAACTCAGTTCTTTTTGCGAATAGAGCACATGTAAATTTGCTGCTAGGAAATTATAGACGTGCTCTAACAGATGCAGAGGAGGCAATTAAGTTGTGCCACTCAAATATAAAGGCAATTTATAGAGCTGCCAAAGCATCTCTTTCATTAAATTTGTTGGCTGAAGCACAATCCCATTGTCGAAATGGCCTTCAGTTGGACCCCAGTAATGAAGAATTGAAGAAACTTGGCCAGCAGATTGACTTAAAAAAATCAGAGCAGGAAAAGCATGAAGCTGAAGTTTCTAAAGCTGTTGCAGAGACAAAGGAACTTGTGTCTGCAATAGAAAATAGAGGCTTGAAGATTGGAAAGGCAGTGTTTCAAGAACTTACTGGACTTAGAAAGCCAGTATTAGACAAAAATAATATTCTTCATTGGCCTGTTCTTCTCCTGTATGCAGAGGTTATGTCCAGTGACTTCATTGAGGATTTCTGTGAGACTGACATGTTCACAGTTCATCTTGATATGATATCCTTTTCTATAAAATGCTTTCCGCTGCCATGGGATGATAAAAACAATTACAAACGTGAATTTGTTGAATTATACTATGAGGCTGGTTCTGGAGTTTGTCTTTCAAAGGCGAAACTTCTTCATTATTTATTAGAGGGGACTGCAGCTTCTCGTGGAGAAAGTTTCGGCGATGAAGAGAAAGATGCAGTTGATGATTCTAACCATGTCATCACGGGCACACCTAAATGGATTAGAGTAAATGAAAGGAAAACGCTCCATGATGTTTTGAAAGACCCCAATTTTATCATTCCCGGCATCCCAGTATTCTATGTCGTTTCAACGCGTTCTAGCTTTTATGGCAAGTTCAAAGCTGGAAAATGGGCTCCTCCGAGCATGAGGGTAAAACAGTTTCAGAGATTCCATGCATCTTTGTTAGCCATCGCTATTCAATTACAGTCTGTATATCTTCTTCCTACAAAGCAAGACGCTTTCTTCAACATCCTTATGACTCGTTCTCTTACAAGTAACACCCCAAAGCATTCGCCTTCTTCCCCTTAG 1251 0.4021 MALWMEQGSEPLTETEKADLDAIAAVKESAAIELKEKGNQYVKMGKKHYSDAIDCYTRAINQKALSDSENSVLFANRAHVNLLLGNYRRALTDAEEAIKLCHSNIKAIYRAAKASLSLNLLAEAQSHCRNGLQLDPSNEELKKLGQQIDLKKSEQEKHEAEVSKAVAETKELVSAIENRGLKIGKAVFQELTGLRKPVLDKNNILHWPVLLLYAEVMSSDFIEDFCETDMFTVHLDMISFSIKCFPLPWDDKNNYKREFVELYYEAGSGVCLSKAKLLHYLLEGTAASRGESFGDEEKDAVDDSNHVITGTPKWIRVNERKTLHDVLKDPNFIIPGIPVFYVVSTRSSFYGKFKAGKWAPPSMRVKQFQRFHASLLAIAIQLQSVYLLPTKQDAFFNILMTRSLTSNTPKHSPSSP 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0863 416 SUPERFAMILY TPR-like 24 158 IPR011990 GO:0005515
Dere02g0863 416 Coils Coil 141 170 - -
Dere02g0863 416 CDD CTWD_Cns1-like 170 355 - -
Dere02g0863 416 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 14 360 - -
Dere02g0863 416 SMART tpr_5 31 66 IPR019734 GO:0005515
Dere02g0863 416 SMART tpr_5 71 104 IPR019734 GO:0005515
Dere02g0863 416 SMART tpr_5 105 138 IPR019734 GO:0005515
Dere02g0863 416 Pfam Cns1/TTC4 Wheel domain 200 269 IPR044059 GO:0051879
Dere02g0863 416 Gene3D Tetratricopeptide repeat domain 27 173 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0863 14 160 Calmodulin-binding Proteins AT3G25230 31.013 3.45e-08 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g0863 02 8208977 8214916 Dere02g0863 02 8208977 8214916 ECH