Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0857 ATGGCTATCACACAATTGACCAATGAATCCTCTGCTTCGTCATCAACTTCAGGATCGCCAAATACACTTTTGCATACGATAGAAGGGTTGCCTGTATTGGAACAAGCGGCAACATGCCTAAATTTGACTCTTCTTCTTTTGTTTCTGTTTACTGTCTTGGCGAGACAGATATTTGTGTTTGTGGTTCGCGCTCGAATTGCTCAGAACAACACGACCGGCAATGCAAGCGCAGTTCGTTGTCCTATTGATGGGGAAATACATGACCTTCGAATTAGTACAGGTTTCAAACTGTCAGTGTTCTTCTGTTTCTATGTTCTCTTTGTGCAAGTGTTGGTGTTAGGATTTGATGGGGCTGCTTTAATTAGAGGAGCGGTTCATGGGAATACTGTGGACTGGTCTCTTCTTTTTTTGCCAGCTTCACAGGGCTTAGCTTGGTTCTTGTTAAGCTTCTCGGCTTTGCATTGCAAATTCAATATGTCCAAGAAGTTTCCATTTTTGTTGAGGGTTTGGTGGTTTTTGTCCTTTTCCATTTGTTTAATTACTTTATATGGTAACGTGAGAGGATTCTTGACGGAAGGTTCAATACACCTCTGTTCTCATACAGTGGCAAATATTGCTGTCACTCCAGCTCATGCCTTCCTGTGTATTGCTGCAATTAGGGGTGTTACAGGTATACAAGTTTGTACCAACTCTGATCTTCAAGAGCCATTACTGACTGAAGCGGAACCAGAGTGTCTCAAGGTTACACCTTACAGTGATGCTGGGCCTTTTAGCTTGGCCACTCTTTCTTGGCTAAACCCACTTCTTTCCGTTGGAGCAAAGAGACCACTTGAGCCTAAGGACATTCCCCTTGTTGCACCAAAGGATAGAGCCAAGACCAATTTTAAGGTTTTGAATTCTAACTGGAGATTGAAAACTGAAAATCCTTCTAAGCAGTCTTCATTAGCTTCGATTCTAATCAAGTCATTTTGGAGGGAGGCAGCTTGCAATGCCATCTTCGCTGGTGTGTGTACTCTAGCCTCATATGTAGGTCCATACATGATAAATTACTTTGTTGACTACTTAAGTGCTGGTAAACAGAATTTTCCTCATGAGGGGTATATCCTTGTGGGTACATTTTTGGCTGCGAAGCTTGTGGAGATCTTGACAGCTCGACAGTGGTATCTAGGGGTGGACATCTTAGGCATGCGTGTTAAGTCAGCTCTAACAGCAATGGTATATCGAAAGGGACTCAGACTCTCAAGCTCGGCCAGGCAAAGTCGCACAAGCGGGGAGATTGTTAACTACATGGCTATCGATGTTGAGAGGGTAGGGGACTACTCTTGGTATCTTCATGACGTGTGGATGCTTCCTCTACAAATCATTCTTGCCCTTGCAATTTTATATAACAATGTTGGATTTGCTGCTTTTGCGACACTGATTGCTACAATCATTTCCATTGTTGTCACTGTTCCGGTGGCTAGGCTACAAGAAGCTTATCAAGGCAAATTAATGGAAGCTAAGGATGAGAGAATGAGGAAAACATCTGAGAGTCTGAGGAATATGAGGATTCTTAAGCTACAGGCTTGGGAGGAAAAATATCGAATAAAATTAGAGGAGATGCGTGGCGTCGAGTACAAGTGGCTTCGGGGAGCCCTCTATTCTCAGGCTTTCATAACTTTCATCTTCTGGAGCTCTCCTATATTTGTTTCTGCTGTCACTTTTGGCACTTCCATTCTGTTAGGTAGTAAGCTGACTGCAGGTGGTGTTCTTTCAGCTCTGGCTACTTTCAGGATCCTCCAAGAACCTCTGAGCGATTTCCCTGACTTGGTATCTATGATGGCTCAGACCAAAGTTTCTCTTGACCGCATAGTTGGTTTCCTGCGGGAGGAAGAACTGCAGCAAGGTGCAACTGTAGTCTTGCCACAAGGCATTTCTAACATTGCCATTGAGATTAAGGATGGAGTCTTTACCTGGGACCCTTCTTCATCGAGGCCTACTTTATCAGGGATACATATGAAAGTGGAACAGGGGATGCGGGTGGCTATTTGTGGCACGGTTGGTTCTGGGAAATCAAGTTTTCTTTCTTGTATACTCGGGGAGATTCCTAAGCTTTCTGGTGATGTAAGAGTGTGCGGCTCTATTGCTTATGTCTCCCAATCAGCATGGTTACAGTCAGGAACTGTCGAAGAAAACATCCTCTTTGGAAGCCCGATGGACAAATCAAAGTACGAGAATGTTCTTCGTGCTTGTTCACTGAAAAAGGATCTGGAGCTATTCTCGCATGGAGACCAGACCATTATTGGTGATAGAGGTATAAACCTAAGTGGTGGCCAGAAGCAGAGGCTGCAGCTTGCCCGAGCACTCTACCAAGATGCTGATATATATCTCCTTGATGATCCTTTAAGTGCGGTTGATGCCCACACTGGATCAGAATTGTTTAGGGAATTCATATTGACAGCATTGGCAGATAAGACAGTCGTTTTTGTGACCCACCAAGTTGAGTTTCTTCCTGCTGCTGATATGATACTGGTTTTGAAAGAAGGTCGCATCATACAGGCAGGAAAATATGATGATCTTTTACAGGCGGGAACAGATTTTGAAACTCTAGTTTTAGCTCACCATGAAGCAATAGAGACTATGGATATTTCTAATCACTCTTCAAAAGATTCAGATGAAAATTTGTCCTTGAATGAATCTGTTATGACCAATAAGAAAATGATTCCTGCAGATATTGATAGTTTGGCAAAGGAAGTGCAAGAAGATCCATCAGTTTTAGATCAAAAAGCAATTGACGAGAAGAAGAAAGGAAAACTCTCAAAAAATGAACGACTTGTTAACGAAGAGGAAAGGGTAAGAGGTAGAATCAGCATAAAGGTGTACATGTCGTACATGGCCGCAGCATACAAAGGCTTATTAATTCCACTCATAATCATTGCAGAAGTACTATTTCAGCTCCTTGAAATTGCCAGTAATTGGTGGATGGCTTCGTCAAATTCTCAGACAACAAGAGCCCAACCCAAAGCAACTCCTATGGTTCTCCTCCTTGTTTACATAGCCCTTGCTTTTGGAAGCTCTTGGTTCATATGTATAAGGGTTGTTTTAGTAGCTACATTTGGTTCAGTAGCTTCACAAAAGCTCTTTCTGAATATGCTTAGAAGTGTTTTCCGTTCACCAATGTCTTTCTTTGACTCTACTCCAGTTGGGAGCATCCTGAATCGTGTATCAACTGATCAAAGTGTTGTGGATCTTGACATTCCTTTTAGACTGGGTGGATATGCTTCAGCGACAATCCAACTTCTTGGTATTGTTGGCGTGATGATAAAAGTTACCTGGCAAATTTCACTTCTACTTGTCCCTAAGGTTGTTGTTTTTTGGTGGATGCAGAAATACTATATGGCTTCCTCAAGGGAATTGGTTCGTATTGTAAACATCCAGAAATCTTCAATTATGCATCTTTTTAGTGAATCAATTGCTGGAGTGGCCACCATAAGAGGTTTTGGACAAGAAAAAAGGTTCACAAAGAGGAATCTTTATCTTTTGGATTGTTTTGCACGATCATTCTTCAACAGTGTTGCAGCTATTGAGTGGCTCTGCCTGCGCATGGAATTACTCTCGGCCTTTGTATTTGCTTTCTGCATGATATTACTAGTGAGCTTTCCACATGGAACTATTGACCCTAGCATGGCTGGACTTGCTGTGACATATGGCTTGAATTTAAATGAATATCTATCGCGGTGGATGCTTAGCTTTTGCAAACTTGAAAATAAAATAATATCTATCGAAAGAATATATCAGTACAGCCAAATTCCAAGTGAAGCACAAGCAATTATTAAAGATTTTCGTCCTCCATCCACATGGCCTGAAAATGGGACAATAGAAATGATTGATTTGAAGGTTCGGTACAAGGAGAATCTTCCTATGGTGCTTCAAGGAATATCATGCACATTTCCTGGTGGGAAGAAAATTGGAATTGTTGGACGTTCTGGGAGTGGCAAATCTACTTTGATTCAGGCATTATTTCGACTAGTTGAGCCAGCAGGTGGGAGTATCCTTATAGACAACATTAATATTTCAAATATTGGTCTTCATGACCTCCGTAGTCATCTTAGTATCATACCACAAGAACCAACTTTATTTGAAGGGACCATCCGGGGCAATCTTGATCCTCTTGAAGAGCACTCAGATAAAGAGGTTTGGGAGGCACTAGATAAGTGTCAGCTTAGCAAGATCATTCGTGAGAAGGAGCAAAAGCTTGATACACCTGTGCTAGAAAATGGAGATAATTGGAGTGTAGGGCAACGACAACTTGTTTCCCTAGGACGAGCTTTACTAAAGCGGTCAAAGATACTTGTTCTTGATGAAGCAACTGCATCAGTTGATATTGCCACCGATAATCTTATCCAAAAGATTATAAGGACAGAGTTCAGTGATTGCACTGTCTGCACTATTGCACACCGTATCCCTACTGTTATTGACAGTGATCTAGTTTTGGTACTTAGTGAAGGTAGAATTGCAGAGTTTGACACTCCATCTCGACTATTAGAGGATAAGTCATCCATGTTTCTAAAGTTGGTGGCTGAGTATTCATCACGCTCAAGTAGCATTCCACATTGA 4596 0.4193 MAITQLTNESSASSSTSGSPNTLLHTIEGLPVLEQAATCLNLTLLLLFLFTVLARQIFVFVVRARIAQNNTTGNASAVRCPIDGEIHDLRISTGFKLSVFFCFYVLFVQVLVLGFDGAALIRGAVHGNTVDWSLLFLPASQGLAWFLLSFSALHCKFNMSKKFPFLLRVWWFLSFSICLITLYGNVRGFLTEGSIHLCSHTVANIAVTPAHAFLCIAAIRGVTGIQVCTNSDLQEPLLTEAEPECLKVTPYSDAGPFSLATLSWLNPLLSVGAKRPLEPKDIPLVAPKDRAKTNFKVLNSNWRLKTENPSKQSSLASILIKSFWREAACNAIFAGVCTLASYVGPYMINYFVDYLSAGKQNFPHEGYILVGTFLAAKLVEILTARQWYLGVDILGMRVKSALTAMVYRKGLRLSSSARQSRTSGEIVNYMAIDVERVGDYSWYLHDVWMLPLQIILALAILYNNVGFAAFATLIATIISIVVTVPVARLQEAYQGKLMEAKDERMRKTSESLRNMRILKLQAWEEKYRIKLEEMRGVEYKWLRGALYSQAFITFIFWSSPIFVSAVTFGTSILLGSKLTAGGVLSALATFRILQEPLSDFPDLVSMMAQTKVSLDRIVGFLREEELQQGATVVLPQGISNIAIEIKDGVFTWDPSSSRPTLSGIHMKVEQGMRVAICGTVGSGKSSFLSCILGEIPKLSGDVRVCGSIAYVSQSAWLQSGTVEENILFGSPMDKSKYENVLRACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRLQLARALYQDADIYLLDDPLSAVDAHTGSELFREFILTALADKTVVFVTHQVEFLPAADMILVLKEGRIIQAGKYDDLLQAGTDFETLVLAHHEAIETMDISNHSSKDSDENLSLNESVMTNKKMIPADIDSLAKEVQEDPSVLDQKAIDEKKKGKLSKNERLVNEEERVRGRISIKVYMSYMAAAYKGLLIPLIIIAEVLFQLLEIASNWWMASSNSQTTRAQPKATPMVLLLVYIALAFGSSWFICIRVVLVATFGSVASQKLFLNMLRSVFRSPMSFFDSTPVGSILNRVSTDQSVVDLDIPFRLGGYASATIQLLGIVGVMIKVTWQISLLLVPKVVVFWWMQKYYMASSRELVRIVNIQKSSIMHLFSESIAGVATIRGFGQEKRFTKRNLYLLDCFARSFFNSVAAIEWLCLRMELLSAFVFAFCMILLVSFPHGTIDPSMAGLAVTYGLNLNEYLSRWMLSFCKLENKIISIERIYQYSQIPSEAQAIIKDFRPPSTWPENGTIEMIDLKVRYKENLPMVLQGISCTFPGGKKIGIVGRSGSGKSTLIQALFRLVEPAGGSILIDNINISNIGLHDLRSHLSIIPQEPTLFEGTIRGNLDPLEEHSDKEVWEALDKCQLSKIIREKEQKLDTPVLENGDNWSVGQRQLVSLGRALLKRSKILVLDEATASVDIATDNLIQKIIRTEFSDCTVCTIAHRIPTVIDSDLVLVLSEGRIAEFDTPSRLLEDKSSMFLKLVAEYSSRSSSIPH 1531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0857 1531 Gene3D ABC transporter type 1, transmembrane domain 929 1268 IPR036640 GO:0005524|GO:0016020
Dere02g0857 1531 MobiDBLite consensus disorder prediction 1 20 - -
Dere02g0857 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1277 1515 IPR027417 -
Dere02g0857 1531 ProSitePatterns ABC transporters family signature. 768 782 IPR017871 GO:0005524|GO:0016887
Dere02g0857 1531 Pfam ABC transporter 1303 1451 IPR003439 GO:0005524
Dere02g0857 1531 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 251 1523 - -
Dere02g0857 1531 CDD ABCC_MRP_domain2 1284 1504 - -
Dere02g0857 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 640 864 IPR027417 -
Dere02g0857 1531 SUPERFAMILY ABC transporter transmembrane region 966 1266 IPR036640 GO:0005524|GO:0016020
Dere02g0857 1531 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 969 1239 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere02g0857 1531 FunFam ABC transporter C family member 5 930 1267 - -
Dere02g0857 1531 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 331 609 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere02g0857 1531 SMART AAA_5 1312 1497 IPR003593 GO:0016887
Dere02g0857 1531 SMART AAA_5 670 851 IPR003593 GO:0016887
Dere02g0857 1531 Gene3D - 620 890 IPR027417 -
Dere02g0857 1531 FunFam ABC transporter C family member 10 311 625 - -
Dere02g0857 1531 CDD ABCC_MRP_domain1 643 843 - -
Dere02g0857 1531 FunFam ABC transporter C family member 3 1269 1521 - -
Dere02g0857 1531 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1286 1520 IPR003439 GO:0005524
Dere02g0857 1531 Gene3D - 1269 1522 IPR027417 -
Dere02g0857 1531 CDD ABC_6TM_ABCC_D1 329 617 IPR044746 GO:0140359
Dere02g0857 1531 Pfam ABC transporter transmembrane region 969 1210 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere02g0857 1531 Pfam ABC transporter transmembrane region 332 597 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere02g0857 1531 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 643 866 IPR003439 GO:0005524
Dere02g0857 1531 FunFam ABC transporter C family member 5 630 875 - -
Dere02g0857 1531 Pfam ABC transporter 661 795 IPR003439 GO:0005524
Dere02g0857 1531 SUPERFAMILY ABC transporter transmembrane region 320 625 IPR036640 GO:0005524|GO:0016020
Dere02g0857 1531 CDD ABC_6TM_ABCC_D2 967 1261 IPR044726 GO:0140359
Dere02g0857 1531 Gene3D ABC transporter type 1, transmembrane domain 318 619 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0857 Dere-ChrDere02 8088175 8094875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0857 643 896 Calmodulin-binding Proteins AT2G36910 28.676 2.21e-24 109