Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0837 ATGGTCTCAAACACCATGGCTGCTTCACACTCCCCAAATGAACTCATCCCTTTCTCTCATCACTCTCATCAGGGAAATAGAGACTATAAACAACAGCAGTTGCTTGCCAATGGTCAAGCGTTATCTTCCGCTGGAACCGTTGTGGGTAAGGATTTCGAAAGGGAAAAAGAATTCATGAGCAATGCAGAATGCAAAGGTAGAGGAAAAGATGACCAAGATGAAGACAACGAGTACATTTCGAGGCAACCATTATGGCGCAAAGTCCCGGTACCTTCGAGCCTAATCAACCCATACCGAATAGTCATCGTGCTGCGTCTCATCATCTTAGCTTTCTTCTTCCGTTTCCGTATTTCATATCCAGTTCACGATGCATACGCCTTATGGCTTATCTCTGTTATTTGCGAACTCTGGTTTGCTCTATCTTGGATTCTTGACCAATTTCCCAAATGGTTTCCCATCACCCGCGAAACTTACCTGGACCGCTTGTCCATTAGGTTTGAGCGTGAAGAGCCAAACCGTCTAGCCCCAATCGATGTGTTTGTGACTACTCTAGACCCTTTCAAGGAACCACCCATTGTAACGGCAAACACGGTTCTCTCAATCTTGTCCGTCGATTACCCTGTTGAGAAGGTCACCTGCTACGTCTCCGATGACGCTGCGTCTATGCTGCTTTTTGATACACTGTCCGAAACTGCTGAATTTGCTAGAAAATGGGTTCCCTTTTGCAAGAAGTATAACATTGAGCCAAGGGCCCCTGAATTCTATTTCTCTCAGAAAATTGATTACTTCAAAGATAAGGTGCACCCCGCATTAGTGAAGGAACGCAGGGCCATTAAGAGAGAGTATGAAGAATTTAAAGTGAAAATTAATGCATTGGTGGCAAAAGCTCAAAAAAAACCAGAAGAGGGGTGGGTGATGCAGAATGGTATCCCGTGGCCTGGGAACAACACTCACAATCATCCAGGAATTTGTCAGGTCTCTTTGGGAGGTGCTGGTACTCTGGACGTCGAAGGTAAGGAACTGCCACGGCTTGTTTATGTTTCACGTGAAAATCGTCCCGCCTATCAAGACCACAAAAAATCTGGTGCCATGAATGCTCTACTTCGAGTTTCCGCTGTGCTTACAAATGCCCCTTTCTTGTTAAATCTGGATTGCGACCACTACATCAACAATAGCAAGGCTATAAGGGAGGCTATGTGCTTCCTATTGAGCCCTCAAGGGAGGGACCTCTGTTTTGTCCAATTTCCACTGAGTTTTGATGGCACTGATCCCCACGATAGATATGCTAACCTCAAGACCATTTTCTTTGATATCAACATGAAAAGCTTTGATGGGATTCAAGGTCCGGTATATGTTGGTAGTGGATGCGTGTTTAACAGGCGGGCTTTATACGGCTATGATCCACAGATGTTTAAGAGAACATCAAGGATGACTTGTGACTGCTGGCCTTCATGGTGTCACTTTAATTGTGGTGGGTCTGACTCAATATTTGATCATGAAGAGATCGATGAAGGGCTTGAAGACTATGATGAGCTTGAAATGCTTGATCTTGAAGAGATTGAAGAAGTGCTTGAAAGTTATGAAGAGCAAGAAATGTTTGATCTTGACGGGAGTGAAGAAGAGCTTGAAGGTAATGGCGGGCCAGACGAATCATCCCTCATGTCCCGGGAAAGTCTCGTGAAACGATTTGGGCACTCACCGGTTTTTATTGCTTCCACTTTGAGGGGTGATGGTGGAGTTGCAGGAGGAACTAATGCTATAATACTGATGAAGGAGGCCATTCATGTTATATGTTGTGACTATGAAGAGAAAACAGAGTGGGGCAAAGAGATTGGTTGGATTTATTGTTCAGTCACAGAAGATATCTTGACTGGTTTTAAGATGCATTGTAGAGGATGGAAATCAACGTACTGCATGCCAAAAAGAGCAGCTTTCAAGGGATCTGCTCCATTAAATCTATCAGATCAGTTATGCCAAGATCTTAAACGGGCTCTTGGTTCTGTTGAGATTTTGTTTAGTCAATATTGCCCACTGTGGTATGGCTATAAAGGAAAATTGAAATGGCTTCAGAGGCTGGCTTATACAAATATTATTGTTTACCCTTTCACTTCCATCCCTTTGCTAATATACTGTGCAATTCCGGCTGTCTGCCTTCTGACTGGAAAGTTCATCATCCCTACTTTGACAAATCTTGCTAGCATTTGGTTAATGGCCCTTTTTATCTCCATCATCTTAACTTGTGTACTAGAGCTTCGGTGGAGTGGGGTTAGCATTCAGGACTGGTGGCGTAACGAGCAATTCTGGATCATTGGAGGTGTTTCTGCACACCTGCTTGCCATAGTTCAAGGTTTCCTTAAAGTTGTAGCTGGAGTGGACAATAATTTCGTTGTACGAACAAAAGCTTCAGGTGATGCTGAATTCTATCTCTTCAAGTGGACTACTCTTCTCATCCTGCCGACCGCTCTCATATTGTTGAATATGGTGGGAATTGTGGCTGGAATATCTGATGCTGTTAACAATGGCTACGGCTCATGGGGACCTTTATTTGGGAAGCTATTTTTAGCCTTCTGGGTTATTGTGCACTTACATCCTTTCCTCGAAGGTCTAATAGGAAAGCAAAACAGGACTCCTACCATCGTAGTCCTTTGGTCACTACTTCTAGCATTAATTTTCTCATTGCTTTGGGTTCGAATTGATCCATTCTTGCCCAAGCAAACTGGTCCAGTACTCAAGCAATGTGGAGTAGAATGCTAA 2754 0.4375 MVSNTMAASHSPNELIPFSHHSHQGNRDYKQQQLLANGQALSSAGTVVGKDFEREKEFMSNAECKGRGKDDQDEDNEYISRQPLWRKVPVPSSLINPYRIVIVLRLIILAFFFRFRISYPVHDAYALWLISVICELWFALSWILDQFPKWFPITRETYLDRLSIRFEREEPNRLAPIDVFVTTLDPFKEPPIVTANTVLSILSVDYPVEKVTCYVSDDAASMLLFDTLSETAEFARKWVPFCKKYNIEPRAPEFYFSQKIDYFKDKVHPALVKERRAIKREYEEFKVKINALVAKAQKKPEEGWVMQNGIPWPGNNTHNHPGICQVSLGGAGTLDVEGKELPRLVYVSRENRPAYQDHKKSGAMNALLRVSAVLTNAPFLLNLDCDHYINNSKAIREAMCFLLSPQGRDLCFVQFPLSFDGTDPHDRYANLKTIFFDINMKSFDGIQGPVYVGSGCVFNRRALYGYDPQMFKRTSRMTCDCWPSWCHFNCGGSDSIFDHEEIDEGLEDYDELEMLDLEEIEEVLESYEEQEMFDLDGSEEELEGNGGPDESSLMSRESLVKRFGHSPVFIASTLRGDGGVAGGTNAIILMKEAIHVICCDYEEKTEWGKEIGWIYCSVTEDILTGFKMHCRGWKSTYCMPKRAAFKGSAPLNLSDQLCQDLKRALGSVEILFSQYCPLWYGYKGKLKWLQRLAYTNIIVYPFTSIPLLIYCAIPAVCLLTGKFIIPTLTNLASIWLMALFISIILTCVLELRWSGVSIQDWWRNEQFWIIGGVSAHLLAIVQGFLKVVAGVDNNFVVRTKASGDAEFYLFKWTTLLILPTALILLNMVGIVAGISDAVNNGYGSWGPLFGKLFLAFWVIVHLHPFLEGLIGKQNRTPTIVVLWSLLLALIFSLLWVRIDPFLPKQTGPVLKQCGVEC 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0837 917 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 332 473 IPR029044 -
Dere02g0837 917 MobiDBLite consensus disorder prediction 1 20 - -
Dere02g0837 917 SUPERFAMILY Nucleotide-diphospho-sugar transferases 187 469 IPR029044 -
Dere02g0837 917 Coils Coil 275 295 - -
Dere02g0837 917 Pfam Cellulose synthase 177 910 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dere02g0837 917 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 82 884 - -
Dere02g0837 917 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0837 Dere-ChrDere02 7908193 7913628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0837 80 917 Cell Wall Biosynthesis AT5G17420 65.444 0.0 1158