Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere02g0836 | ATGACAACCTTTGACAAGGCTCCTGCTCTCCTCTTGCACATACTCTTGCTGTGTCTTCTTCCACTGAAGATAACTGCATCACTGAGAACAGAAGCAGAAGTTCTCGTCAAATGGAAAAACAGTTTGTCTCCTCTTCCATCTTCTCTCAACTCATGGTCCCTCACCAATCTGGACAACCTTTGCCATTGGGGTGCCATTGTTTGTGACAGTACTAATACAACAGTGTCAGAGATAAGCCTCTCGGGGGCAAATGTTTCTGGGACACTTATGGGGTTGGATTTTGCTTCCCTCCCAAATCTCACCCACCTCAACCTCAACAACAACGATTTTAGTGGGACAATACCATCTGCTATTGGCAACCTCTCCAAGCTCATTCTCTTGGACTTGGGAAACAACTTATTTGATGGGGCACTGCCTACTGAGCTAGACCAGCTGAAGGAACTTCAATATTTGAGTTTTTACAACAACAACCTTAAAGGGACCATTCCCAATCAGATCACGAATCTCCTAAAGGTATGGCATCTAGACTTTGGATCAAACTACTTTATCAATCCTTCTGATTGGTCAAAATATTCAGGCATGTCTTCCTTGACCCACCTCAGTTTGGCTCTCAATAAATTCACTTCTGAATTTCCAAGTTTCATTCTAGAGTGTCAAAACTTGAGATATCTTGACCTGTCTCACAATAATATTAGCCTGATACCAGAGTTGTTGTATACCAATTTGGGCAAGCTTGAATATTTAAATCTGACCAATTGTGGGCTAGAAGGACAATTGCCATCAAACTTGTCCAAGCTTTCCAATCTCAAAGAAATTCATCTGAATGTTAACAAATTTAATGGTTCTATTATCATGGCCATAGGATTGATATCAGGTCTACAAATTCTTGAATTGAACGAGAATTCACTCCAAGGGGAAATTCCTTCCTCTCTGGGCCAACTTAGTGAGCTATCGCATCTTGATCTCCGCATGAATTTCTTGAATTCGACAATTCCTTCTGAGCTTGGTCTCTGTAGCAATCTAACCTACTTGGCTTTGGCAAAGAATTATTTGACTGGCTCTTTGCCTATGTCCTTATCCAATCTGACCAAAATTAAAGACTTGGGTTTATCAGATAATTTATTTTCTGGACAAATTCCTGCTTCGCTGATCTCTAATTGGATTGAGTTGGCTTCTTTGCAAATTCAAAACAATTCATTCGAGGGGAAAATTCCTGCAGAGATTGGACTTTTGACAAAAATCAATTTTCTCTATCTTTACAATAATCAATTCTCTGGTCCTATCCCTCCTGAGATTGGAAACTTGAAAGAAATGAACGAACTAGACCTTTCTGCAAACCAATTCTCTGGTCCGATTCCTTCAACCATAGGAAGTCTTAAAAACATTACAGTCATAAATCTTTCCTTCAATAATCTCTCAGGAACCATTCCCATGGAAATTGGAAACCTTACTTCATTGCAAATTTTCAATGTCAACAATAATCTTTTATATGGAGAGTTGCCAATGACTATTTCCCAGCTAACGGAGTTACAATTACTTTCTGTGTTCACTAATAAATTTTCGGGCAACATTCCCAGAGATTTTGAGAAGTATAGCCCAAATTTGAGACAAATATACATTTCAAATAACAGCTTCTCAGGAGAACTGCCGCCTGACTTGTGCAGTGGTTTTGCACTTGTGGACTTGATGGTTAATAACAATAGCCTTTCAGGACCATTGCCAAACTGCTTGAGAAATAGTTCAGCACTAACAAGGGTGAAGCTTGAAAGAAATCGCTTCACTGGAAACATCACAGAAGCATTTGGGGTTCACCCAAGTCTTACATCTATCACACTTAGTGACAATCAGCTTGTTGGTGAACTTTCTCCAGAATGGGCTGAATGTTTAAACTTGACCAGGATAGAGATGGGTAACAATAAACTTTTTGGAAAAATTCCACCTGAGCTAGGTAAGTTAAGCCAATTGAAATATCTAAGCCTACACTCCAATGAATTCACTGGCAGCATTCCACAAGAAATAGGAAATCTAAGGCAGCTGTACTTGTTCAACTTGAGCAGTAACCGTTTGATAGGAGAAATCCCCCAGAGTATCGGTAGATTGGCTCAGCTTTATTATCTTGATTTATCAAATAACAACTTCACCGGAAGCATTCCAGAAGAGCTTGGTGATTGTGACAGTTTAATGAGCTTGAATTTAAGCCATAACAATCTAGTTCGGGAGATACCATCTGAACTTGGCAATCTGTTCTCGCTCCAATACTTCTTAGACCTCAGCAGTAACTCTCTTTCAGGGTCAATTACTCAAAACCTTCAAAAGCTCATTCATTTGGAAATCCTGAATGTCTCACACAATCATCTTTCAGGGACAATCCCACAATCATTTTCAAGTATGCTCAGTCTACAGTCCATCGATTTTTCTTACAACAACTTGACAGGTCCAATCCCCACTGATGGTATTTTCCAACTAGCAACTTCTGAAGCTTACGTTGGAAATTCTGGTTTGTGTGGCAAGGCAAAAGGATTAATTGCCTGCTCCATAGAATCTTCCTCAGAAAAATCTAGTGGGATAAACAAAAAGGTTCTTCTTGGTGTTGTTATACCAGTTTGTGGGTTATTAATTTTTGGGGTGATTGTTGTTGGAATCCTAGTGTCCTGTCGACGGACCAAACTTCTTGATGAAGAGACCAAAGATGCTACACTGTATGAAAAAGCGGTGTGCACAATAAGGGGACGAAACGAAAAATTCACATTTACTGAAATTGTTAAAGCCACAGATGACTTCAATGACAAATACTGCATCGGAAGAGGAGGTTTTGGAAGTGTTTACAAAGCAGCATTACCTACAGGTCTAGTTGTCGCCGTCAAAAGACTCAATATTACAGATTCTACAGACATTTCAGATGAGAATCTTCGGAGCGTTGAGAATGAAATAAGAACACTTACGGAAGTGAAGCACCGAAACATCATAAAGCTTTTTGGGTTCTGTTCCAACAGGGGACATGTATACTTGGTTTACGAATATGCAGAGAGAGGAAGTTTGGGAAAAGTGTTGTATGGAGAGGAAATGAAAACGGAGCTAAGCTGGCCTCAAAGGGTGAAAATTGTGCAAGGAATAGCACAAGCAATTGCGTACCTACACAGCGACTGTAACCCACCCATTGTGCACCGAGATGTAACATTGAATAATATATTGCTTGACTTAGAAGTTGAACCTCACCTTGCGGATTTTGGCGTAGCGAAGCTTCTTAGTCCCAATTCAACAAGCTGGACCTCAGTTGCTGGCTCCTATGGCTACATGGCTCCAGAGCTAGCACAAACTAGGAGAGTCACAGAGAAGTGCGATGTTTATAGTTTTGGAGTCGTGGCGCTAGAGATAATTTTGGGAAAGCAACCTGGAGATCTCTTGGCTACGTTGTCGTCAATGGAAGATCCACGGCTTTTTCTCAAGGATGTGATAGACCAAAGACCTCCACCTCCGACGGCTCAATTAGGTGAAGTGATAGCGTTCATAATGACTATAGCCTTGGCGTGTACGCGTACTGTTCCCCAGTCTAGACCCACGATGCGTTTTGTGGCTCAAGAACTATCGGCTCAAGCGCGAGCTTGTCTAGCTGAACCGTTTGGAACGAGGAACTAG | 3636 | 0.4092 | MTTFDKAPALLLHILLLCLLPLKITASLRTEAEVLVKWKNSLSPLPSSLNSWSLTNLDNLCHWGAIVCDSTNTTVSEISLSGANVSGTLMGLDFASLPNLTHLNLNNNDFSGTIPSAIGNLSKLILLDLGNNLFDGALPTELDQLKELQYLSFYNNNLKGTIPNQITNLLKVWHLDFGSNYFINPSDWSKYSGMSSLTHLSLALNKFTSEFPSFILECQNLRYLDLSHNNISLIPELLYTNLGKLEYLNLTNCGLEGQLPSNLSKLSNLKEIHLNVNKFNGSIIMAIGLISGLQILELNENSLQGEIPSSLGQLSELSHLDLRMNFLNSTIPSELGLCSNLTYLALAKNYLTGSLPMSLSNLTKIKDLGLSDNLFSGQIPASLISNWIELASLQIQNNSFEGKIPAEIGLLTKINFLYLYNNQFSGPIPPEIGNLKEMNELDLSANQFSGPIPSTIGSLKNITVINLSFNNLSGTIPMEIGNLTSLQIFNVNNNLLYGELPMTISQLTELQLLSVFTNKFSGNIPRDFEKYSPNLRQIYISNNSFSGELPPDLCSGFALVDLMVNNNSLSGPLPNCLRNSSALTRVKLERNRFTGNITEAFGVHPSLTSITLSDNQLVGELSPEWAECLNLTRIEMGNNKLFGKIPPELGKLSQLKYLSLHSNEFTGSIPQEIGNLRQLYLFNLSSNRLIGEIPQSIGRLAQLYYLDLSNNNFTGSIPEELGDCDSLMSLNLSHNNLVREIPSELGNLFSLQYFLDLSSNSLSGSITQNLQKLIHLEILNVSHNHLSGTIPQSFSSMLSLQSIDFSYNNLTGPIPTDGIFQLATSEAYVGNSGLCGKAKGLIACSIESSSEKSSGINKKVLLGVVIPVCGLLIFGVIVVGILVSCRRTKLLDEETKDATLYEKAVCTIRGRNEKFTFTEIVKATDDFNDKYCIGRGGFGSVYKAALPTGLVVAVKRLNITDSTDISDENLRSVENEIRTLTEVKHRNIIKLFGFCSNRGHVYLVYEYAERGSLGKVLYGEEMKTELSWPQRVKIVQGIAQAIAYLHSDCNPPIVHRDVTLNNILLDLEVEPHLADFGVAKLLSPNSTSWTSVAGSYGYMAPELAQTRRVTEKCDVYSFGVVALEIILGKQPGDLLATLSSMEDPRLFLKDVIDQRPPPPTAQLGEVIAFIMTIALACTRTVPQSRPTMRFVAQELSAQARACLAEPFGTRN | 1211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere02g0836 | 1211 | Pfam | Leucine rich repeat | 98 | 158 | IPR001611 | GO:0005515 | |
Dere02g0836 | 1211 | Pfam | Leucine rich repeat | 196 | 255 | IPR001611 | GO:0005515 | |
Dere02g0836 | 1211 | Pfam | Leucine rich repeat | 677 | 737 | IPR001611 | GO:0005515 | |
Dere02g0836 | 1211 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1009 | 1204 | - | - | |
Dere02g0836 | 1211 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 1053 | 1065 | IPR008266 | GO:0004672|GO:0006468 | |
Dere02g0836 | 1211 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 | 533 | 848 | - | - | |
Dere02g0836 | 1211 | Gene3D | Ribonuclease Inhibitor | 189 | 503 | IPR032675 | - | |
Dere02g0836 | 1211 | ProSitePatterns | Protein kinases ATP-binding region signature. | 933 | 955 | IPR017441 | GO:0005524 | |
Dere02g0836 | 1211 | SMART | LRR_typ_2 | 194 | 218 | IPR003591 | - | |
Dere02g0836 | 1211 | SMART | LRR_typ_2 | 411 | 435 | IPR003591 | - | |
Dere02g0836 | 1211 | SMART | LRR_typ_2 | 145 | 169 | IPR003591 | - | |
Dere02g0836 | 1211 | SMART | LRR_typ_2 | 483 | 507 | IPR003591 | - | |
Dere02g0836 | 1211 | SMART | LRR_typ_2 | 700 | 724 | IPR003591 | - | |
Dere02g0836 | 1211 | SMART | LRR_typ_2 | 533 | 556 | IPR003591 | - | |
Dere02g0836 | 1211 | SMART | LRR_typ_2 | 652 | 676 | IPR003591 | - | |
Dere02g0836 | 1211 | SMART | LRR_typ_2 | 726 | 748 | IPR003591 | - | |
Dere02g0836 | 1211 | SMART | LRR_typ_2 | 242 | 266 | IPR003591 | - | |
Dere02g0836 | 1211 | SMART | LRR_typ_2 | 97 | 121 | IPR003591 | - | |
Dere02g0836 | 1211 | SMART | LRR_typ_2 | 773 | 796 | IPR003591 | - | |
Dere02g0836 | 1211 | SMART | LRR_typ_2 | 219 | 241 | IPR003591 | - | |
Dere02g0836 | 1211 | SMART | LRR_typ_2 | 797 | 822 | IPR003591 | - | |
Dere02g0836 | 1211 | SMART | LRR_typ_2 | 314 | 338 | IPR003591 | - | |
Dere02g0836 | 1211 | SUPERFAMILY | Protein kinase-like (PK-like) | 912 | 1195 | IPR011009 | - | |
Dere02g0836 | 1211 | FunFam | Leucine Rich Repeat family protein, expressed | 188 | 283 | - | - | |
Dere02g0836 | 1211 | ProSiteProfiles | Leucine-rich repeat profile. | 220 | 241 | IPR001611 | GO:0005515 | |
Dere02g0836 | 1211 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 423 | 1195 | - | - | |
Dere02g0836 | 1211 | Pfam | Leucine Rich Repeat | 775 | 796 | IPR001611 | GO:0005515 | |
Dere02g0836 | 1211 | FunFam | Nuclear pore complex protein NUP107 | 28 | 186 | - | - | |
Dere02g0836 | 1211 | FunFam | MDIS1-interacting receptor like kinase 2 | 1008 | 1201 | - | - | |
Dere02g0836 | 1211 | SUPERFAMILY | L domain-like | 48 | 383 | - | - | |
Dere02g0836 | 1211 | FunFam | Leucine-rich repeat receptor protein kinase MSP1 | 891 | 1007 | - | - | |
Dere02g0836 | 1211 | Gene3D | Ribonuclease Inhibitor | 28 | 188 | IPR032675 | - | |
Dere02g0836 | 1211 | Gene3D | Ribonuclease Inhibitor | 504 | 845 | IPR032675 | - | |
Dere02g0836 | 1211 | SUPERFAMILY | RNI-like | 289 | 617 | - | - | |
Dere02g0836 | 1211 | Gene3D | Phosphorylase Kinase; domain 1 | 888 | 1007 | - | - | |
Dere02g0836 | 1211 | Pfam | Protein kinase domain | 929 | 1188 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dere02g0836 | 1211 | ProSiteProfiles | Protein kinase domain profile. | 927 | 1208 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dere02g0836 | 1211 | FunFam | Leucine-rich repeat receptor-like protein kinase TDR | 287 | 532 | - | - | |
Dere02g0836 | 1211 | SUPERFAMILY | RNI-like | 504 | 812 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere02g0836 | Dere-ChrDere02 | 7900063 | 7903792 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere02g0836 | 10 | 646 | Receptor kinase-like Gene Family | AT4G08850 | 31.875 | 5.88e-80 | 282 |