Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0821 ATGGACCCTGTGATTGCCGGAAAGTTTAAACTGGGGAGGAAAATTGGGAGTGGATCTTTTGGGGAGCTTTATTTAGGTGTTAATGTACAGAATGGAGAGGAGGTGGCTGTTAAGCTGGAACCTGTGAAGAGCAGGCATCCACAGCTGCACTATGAATCAAAATTATATATGCTTCTTCAAGGAGGAACGGGGATTCCTCACCTCAAGTGGTTCGGAGTTGAGGGAGAATACAATGTTATGGTTATTGACCTCCTTGGGCCAAGCTTGGAAGATCTGTTCAACTATTGCAACCGGAAGTTCACATTAAAGACAGTTTTGATGCTTGCTGATCAATTAATTAACAGAGTTGAATATATGCATTCAAGAGGTTTTCTTCACCGTGACATAAAGCCTGATAATTTTTTGATGGGTCTGGGGCGCAAAGCAAACCAGGTTTACATCATTGATTATGGTCTTGGAAAGAAGTTTAGGGATCTCCAGACTCATAAGCACATACCATACAGGGAAAACAAGAACCTCACTGGTACAGCTCGCTATGCAAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGAGATGATCTGGAATCTCTTGGTTATGTGCTCATGTACTTCTTAAGAGGAAGTCTTCCCTGGCAGGGTCTGAAGGCCGGCAACAAAAAACAAAAGTATGATAAGATCAGTGAGAAGAAGTCATCAACTCCAATTGAGGTTCTCTGCAAAACATATCCATCTGAGTTTGTATCCTACTTCCACTACTGCCGATCTTTGCGGTTTGAGGATAAGCCAGATTATTCATATTTAAAGAGGCTTTTTCGAGACTTGTTTATTCGAGAAGGCTATCAGTTTGACTATGTTTTTGACTGGACTATTTTGAAGTATCCACAGATTGGTGGCAGCTCTAGAGGGCGGCATGGCACTGGCAAGGCACTTATGAATGCTGGACCATCAGTACAAAGGCCAGAAAAGATCCCAGGTGGCAAAGAGATTCGAGAGAAATTTTCTGGTGCTGTTGAAGCATTTTCCCGGAGGAATCCCACAAGTTCTAGTCCTCATGGTGACCACGCCAAAAATAGGACTTTGGAGGATGTACCGTCACACAAGGATGTGCAGTATGATCAAGAGAAGGGACGCAGTTCCTCTCGATATGGCAGCACTTCAAGAAAAGCCATAATCTCATCAAACAAGCTGAGTTCCTCATGTGACCATAGTGATATTCGTACCGGTCGGTTGACATCGAATGGTAGCCGCCCATCTAGCACTTACAGAGGTCAACCTGTGCCTGAGTCCAAACAACCAACTTTTACACGCAATGCATCTACGAGAGTCAATCGTGATGATCCTCTTCGGAGCTTTGAGCTCCTCTCTCTTAGGAAGTAA 1383 0.4375 MDPVIAGKFKLGRKIGSGSFGELYLGVNVQNGEEVAVKLEPVKSRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLGKKFRDLQTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGNKKQKYDKISEKKSSTPIEVLCKTYPSEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGGSSRGRHGTGKALMNAGPSVQRPEKIPGGKEIREKFSGAVEAFSRRNPTSSSPHGDHAKNRTLEDVPSHKDVQYDQEKGRSSSRYGSTSRKAIISSNKLSSSCDHSDIRTGRLTSNGSRPSSTYRGQPVPESKQPTFTRNASTRVNRDDPLRSFELLSLRK 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0821 460 MobiDBLite consensus disorder prediction 378 443 - -
Dere02g0821 460 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0821 460 MobiDBLite consensus disorder prediction 444 460 - -
Dere02g0821 460 CDD STKc_CK1_delta_epsilon 8 282 - -
Dere02g0821 460 PANTHER CASEIN KINASE-RELATED 13 373 - -
Dere02g0821 460 MobiDBLite consensus disorder prediction 342 460 - -
Dere02g0821 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Dere02g0821 460 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0821 460 MobiDBLite consensus disorder prediction 301 329 - -
Dere02g0821 460 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0821 460 MobiDBLite consensus disorder prediction 356 377 - -
Dere02g0821 460 FunFam Casein kinase 1-like protein 1 330 - -
Dere02g0821 460 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Dere02g0821 460 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Dere02g0821 460 FunFam Putative Casein kinase I 1 85 - -
Dere02g0821 460 Gene3D Transferase(Phosphotransferase) domain 1 1 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0821 Dere-ChrDere02 7751560 7757625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0821 8 213 MAP Kinase Kinase Kinase AT3G06030 25.463 4.70e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Dere02g0821 Pkinase 8.1e-25 CL0016