Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0820 ATGGATTCCGCGAGGAGCTGGTTGCAGAAGTTACAACCACGGGATAAAATGAGGTCATCTTTAAAGAAAAAGGAGGATAGTGCTGGAATAGATTCAAATCAACCAGTAGATGAAGAAGCTCTTTCCAGTATCACAAAGCAGAAGGTTGCTGCAGCAAAGCAGTATATTGAAAACCATTACAAGGAGCAAATGAAGAACCTACAGGAGAGGAAGGAGCGTCGAATTATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCAGAGGAAGATCAAAACAACCTGCTTAAGTTTCTAGAGAAAAAGGAAACAGAATATATGCGCCTTCAAAGGCATAAGATGGGTGTTGATGATTTTGAGTTATTAACTATGATTGGGAAAGGTGCATTTGGAGAGGTCAGAGTCTGCAGGGAAAAGACAACAGGTCATGTATATGCAATGAAAAAGCTAAAGAAGTCAGAGATGCTTCGTAGAGGCCAGGTAGAACATGTCAGAGCTGAAAGAAACCTCCTTGCGGAGGTTGACAGCAATTGCATAGTCAAACTTTACTGTTCTTTCCAGGATGATGAGTATTTGTATCTTATTATGGAGTATCTACCTGGAGGAGATATGATGACCCTTCTTATGAGAAAAGATACCTTGACCGAAGATGAAGCCAGATTTTATGTTGGAGAAACAGTTCTGGCTATTGAATCTATACATAAACACAATTATATCCATCGGGATATCAAGCCTGATAATTTGCTACTTGATAGATATGGACACTTGAGACTTTCAGATTTTGGACTATGTAAACCATTAGATTGCAGCACGCTTCAAGAACAAGATTTTTCAATAGGTCAGAATGCAAATGGATCTACACAGAATGATGAACGCTCAGCTCCAAAACGCACACAACAAGAACAATTACAGCACTGGCAAAAGAACAGAAGGACACTTGCTTATTCTACTGTTGGCACACCTGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGTTATGGAATGGAATGTGACTGGTGGTCACTTGGAGCTATTATGTATGAAATGTTGGTGGGATACCCACCTTTTTATTCTGATGATCCAATGTCAACATGTAGAAAGATAGTAAATTGGAAATCACACTTGAAATTTCCAGAAGAAGCAGGGCTATCTCCAGAGGCTAAAGATCTTATTAGTAAACTTTTGTGTAATGTCAACCACAGGCTAGGGTCAAATGGTGCTGATGAAATAAAGGTTCATCCATTCTTCAAAGGTGTTGAATGGGATAAGCTATATCAAATGGAAGCTGCATTTATTCCTGAGGTTAATGATGAATTAGATACTCAAAATTTTGAAAAATTTGAAGAGTCAGACATCCAAAATCATCAAGCATCAAGAGCTGGTCCTTGGAGGAAGATGCTTTCATCTAAGGACTTGAATTTTGTTGGATACACATATAAGAACTTTGAAATTGTCAATGACTATCAAGTTCCTGGGATGGCTGAATTGAAGAAGAAATCTGGCAAATCAAAGAGGCCATCTATCAAGTCTCTTTTTGATGGCGAGTCAGAGACATCAGGGGTGTCTGCTGCTTCAGATGCATCTGCAAGCAATCAATCTTCTCAAGGAAGCTTTCTAAACCTCTTGCCACCCCGATTAGAGGTATCTCATAAAGAGAAGGAATCCTCCTAA 1671 0.392 MDSARSWLQKLQPRDKMRSSLKKKEDSAGIDSNQPVDEEALSSITKQKVAAAKQYIENHYKEQMKNLQERKERRIILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSTLQEQDFSIGQNANGSTQNDERSAPKRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEAGLSPEAKDLISKLLCNVNHRLGSNGADEIKVHPFFKGVEWDKLYQMEAAFIPEVNDELDTQNFEKFEESDIQNHQASRAGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKKKSGKSKRPSIKSLFDGESETSGVSAASDASASNQSSQGSFLNLLPPRLEVSHKEKESS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0820 556 MobiDBLite consensus disorder prediction 279 301 - -
Dere02g0820 556 FunFam Non-specific serine/threonine protein kinase 315 434 - -
Dere02g0820 556 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dere02g0820 556 Pfam Protein kinase C terminal domain 435 479 IPR017892 GO:0004674|GO:0005524|GO:0006468
Dere02g0820 556 Gene3D Transferase(Phosphotransferase) domain 1 202 434 - -
Dere02g0820 556 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Dere02g0820 556 MobiDBLite consensus disorder prediction 1 41 - -
Dere02g0820 556 Gene3D Phosphorylase Kinase; domain 1 116 445 - -
Dere02g0820 556 SMART pkinase_C_6 417 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dere02g0820 556 MobiDBLite consensus disorder prediction 512 540 - -
Dere02g0820 556 SMART serkin_6 118 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0820 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Dere02g0820 556 ProSiteProfiles Protein kinase domain profile. 118 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0820 556 CDD STKc_NDR_like 116 480 - -
Dere02g0820 556 FunFam Non-specific serine/threonine protein kinase 89 201 - -
Dere02g0820 556 SUPERFAMILY Protein kinase-like (PK-like) 91 467 IPR011009 -
Dere02g0820 556 Pfam Protein kinase domain 119 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0820 556 MobiDBLite consensus disorder prediction 9 31 - -
Dere02g0820 556 CDD MobB_NDR_LATS-like 52 113 - -
Dere02g0820 556 FunFam Non-specific serine/threonine protein kinase 202 269 - -
Dere02g0820 556 PANTHER SERINE/THREONINE-PROTEIN KINASE 34 477 - -
Dere02g0820 556 MobiDBLite consensus disorder prediction 498 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0820 Dere-ChrDere02 7735070 7747015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0820 1 512 AGC Kinase Gene Family AT2G20470 79.961 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Dere02g0820 Pkinase 1.3e-63 CL0016