Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0814 ATGGGTCTTAGAGACATTGGGGCGTCACTTCCTCCTGGGTTTCGGTTTTATCCCAGCGATGAGGAGCTGGTGTGTCATTACCTGTACAAGAAGATTACAAATGAGGAAATTCTGAAGGGTACTTTGGTGGAAATAGACTTGCATACTTGCGAGCCATGGCAGCTTCCCGAGGTGGCTAAGCTGAACGCAAACGAATGGTACTTCTTCAGCTTCCGTGACCGTAAATACGCCACTGGATTTCGGACCAATCGAGCGACGACATCTGGCTATTGGAAAGCGACAGGGAAGGATAGGACAGTGCTGGACCCAATCACACGTGAGGTTGTAGGGATGAGGAAGACGTTGGTGTTCTATAGGAACAGAGCCCCCAATGGTATGAAAACTGGCTGGATCATGCATGAGTTCCGCTTGGAGACCCCACACATGCCACCTAAGGAGGACTGGGTTTTATGTAGAGTCTTTTATAAAAGCAGAGTAGACAACAGTGCCAAACTTAACCCACAAGATATGTTTGAGACCAAACCTTCCTTAAATTTGGCTTCTTCATCTCCAACCAATCAAACTCTGCCTGCTGGCTTTACTTCTTTCTCCTCCATGCCTACCCATAATTATCAGTACCAGAACCAAAGCAGTTCTCTAATGAATCTCCTTCAATTTTCTCGGGAAACAAACACCAACAACAGCAGTACTGTTACTCAAGTTATTCCAAAAGGTGATCACGATGGATATGATGGGTTCTTATGGGACATGGATCTGGAAGAAAACAGCTTCCACAATGACGTGACCGCGAACTTAGACGGAGTGAGTTTCGAGGTTGTCAACGACAGTATGGTCTTGTTATAA 843 0.4591 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNEEILKGTLVEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVLDPITREVVGMRKTLVFYRNRAPNGMKTGWIMHEFRLETPHMPPKEDWVLCRVFYKSRVDNSAKLNPQDMFETKPSLNLASSSPTNQTLPAGFTSFSSMPTHNYQYQNQSSSLMNLLQFSRETNTNNSSTVTQVIPKGDHDGYDGFLWDMDLEENSFHNDVTANLDGVSFEVVNDSMVLL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0814 280 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Dere02g0814 280 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Dere02g0814 280 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Dere02g0814 280 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Dere02g0814 280 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0814 Dere-ChrDere02 7665542 7669088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0814 6 179 NAC Transcription Factor Family AT1G56010 53.297 1.50e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere02g0814 NAM 1.1e-37 No_clan