Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0808 ATGGCTTTTCTCTCAACACGGTTTCGATACCTGTTACTCAAGTTCGAATACTCTGCGGCAATCACCTTGAAGAACCACCAAAAAGGTCAAGTTGCAGTCAGAGACATACCTGGCACTCTTTGGAAGAATATTCCTAGAAAATTGACATACCTGCACTGCAATGAAGGAGGAGAGGAGATGGCGCCTACTATAACTAGAAATGGAGTAACTCTTGTTCGGAAATTACCAATTGCAGACCCAATGCGTGTTTTTGTAGGAGATGTGGTGGTCATGAAGGACCCTGAGAATAAAGATAGCCATCTAATAAGAAGACTAGCTGCCATTGAAGGCCATGAAATGGTTTCTACTGATGAAAATGATGAATGCTTTACTCTTGAGAAGAATGAATGCTGGGTGGTGGCTGACAATGTAAATTTGAAACCCAAGGAAGCATATGACAGTCGAATATTTGGTCCAGTTCAAATGACAGATATTGTAGGCAGAGTCATCTATTCCATGCGAAACGTTATAGACCATGGTCCAGTCTTAAATAGTGCTTATAGCCGGAGAAATGATTCGCCAGTGTTGGAAGTAGAACTGGATATTGTTGAGATGTCAAAAAGTCTCAAAGTTTGA 615 0.4114 MAFLSTRFRYLLLKFEYSAAITLKNHQKGQVAVRDIPGTLWKNIPRKLTYLHCNEGGEEMAPTITRNGVTLVRKLPIADPMRVFVGDVVVMKDPENKDSHLIRRLAAIEGHEMVSTDENDECFTLEKNECWVVADNVNLKPKEAYDSRIFGPVQMTDIVGRVIYSMRNVIDHGPVLNSAYSRRNDSPVLEVELDIVEMSKSLKV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0808 204 CDD S26_SPase_I 57 162 IPR019533 GO:0004252|GO:0006465
Dere02g0808 204 PANTHER OSJNBA0068L06.9 PROTEIN 1 202 - -
Dere02g0808 204 SUPERFAMILY LexA/Signal peptidase 57 169 IPR036286 -
Dere02g0808 204 Gene3D Umud Fragment, subunit A 54 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0808 Dere-ChrDere02 7626667 7630509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0808 60 175 MADS-box Gene Family AT1G29960 29.752 3.27e-07 45.8