LGRPv2

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Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere02g0806	ATGCCATCTCTAATTTCTCCCGGGAAAATCCATCGCTTGGAGATGGAAAATTTCAAGTCTTACAAGGGTCTACAAGTAATTGGTCCTTTCTACGACTTCACCGCAATTATTGGTCCCAATGGTGCTGGCAAATCGAACCTTATGGACGCCATTAGCTTTGTGCTCGGTGTAAGGACGGGCCAGCTGCGTGGGGCTCAGCTCAAGGACTTAATCTACGCCTACGATGACAAGGAAAAAGAGCAGAAGGGACGGAGGGCATTCGTTCGTTTGGTTTATCAGTTGGGCAATGGGTCGGAGATACAATTCACTAGGACTATTACGAGCTCCGGCGGGAGCGAGTACCGTATTGATGGGAACGTTGTAACGTGGGATGTGTATAATGCTAGACTGAAGTCACTTGGTATTCTTGTCAAGGCTCGCAATTTCTTGGTGTTTCAGGGTGATGTGGAATCCATTGCATCCAAAAATCCAAAAGAGCTTACTGCCCTCCTTGAGCAGATATCTGGCTCTGATGAGCTCAAGAGAGACTATGAGCAATTTGAAGAAGAAAAAGCCAGAGCTGAAGAAAAATCAGCTCTTGTTTATCAGAAGAAGAAGACAGTAGTTATGGAGAGAAAGCAGAAGAAAGAACAAAAGGAAGAAGCAGAGAAACATCTTCGCTTGCAGGATCAACTGAGAACTATAAAGAAAGAGCATTTTTTGTGGCAGTTGTTCAACATAGAAAACGATATTGAAAAGACCTCTGATGATCTTGAGGATGAGAAAAGAAGTCGTGAAGGTGTCATGGAAGAACTAGAAAAATTTGAAGCTGAGGCTAGTAAGAAGAAGAAAGAACAGGCAAAATATCTGAAAGAGATTGCACAATGTGAAAGGAGAATTGGTGAGAGAAGCAACAAACTTGACAAGAATCAACCTGAACTTCTGAAGTTGAAGGAGGAAATAGCTCGTATTAACTCAAAAATTAAAAAAGGAAAGAAGGAGCTGGATAGAAAAAGAGAAGAACGGAGAAAACATGCTGGTGATATAACAGAGCTGCAGCGGGGTATACGAGATCTTACTGCAAAATTGGAAGATCTTCAGGAAAAGAGTCGAGATGTTGGTGATGAACTAAAGTTAGATGGCAGTGACCTGGAAGAATATTTTCGAATCAAAGAGGAAGCTGGGATGAAGACTGCAAAGCTTAGAGAGGAGAAGGAGCTTCTGGATAGGCAACAACATGCAGATAGTGAAGTTCAAAAAAATTTGGACGAAAATCTTCAACAGTTAAAGAATAGGGAGTCTGAATTGAATTTACAGGAAGAACAGATGCGAACAAGGCTGAAAAAAATTCTTGATAATTCTACAAAACATAAGGATGACCTTGCGAACTTGAAAAAAGAATTGCGTGTGATGCAGGACAAACATCGAGATTCTAGGAAAAAATATGAAAATTTAAAGTTAAAAATTGGTGAAATTGAAAATCAACTACGTGAATTGAAGGCTGATCGATATGAAAATGAGAGAGATGCAAGGCTTTCTCAAGCTGTGGAGAGTCTCAAACGCCTGTTTCAAGGAGTCCATGGTCGCATGACTGATCTTTGTCGGCCAACACAGAAGAAGTATAACTTAGCTGTTACTGTTGCAATGGGTAAATTTATGGATGCAGTTGTAGTTGAGGATGAAAAGACTGGAAAGGAATGCATCAAGTATTTGAAAGATCAGAGGCTTCCTCCTCAGACATTTATTCCTCTGCAATCAGTTCGTGTGAAGCCAATAATTGAAAGACTGCGCACGTTAGGTGGTTCAGCAAAGCTGGTTTTTGACTGCAAGTTTGATCCTGCCTTGGAGAAGGCAATTCTCTTTGCTGTTGGGAATACTCTTGTTTGTGATGATCTTGAGGAGGCCAAAGTTTTAAGCTGGAGTGGGGAGAGGTTCAAGGTTGTAACTGTGGATGGAATTTTGCTGACAAAGTCTGGCACAATGACTGGTGGCACTAGTGGTGGAATGGAGGCTAGGTCAAAACAGTGGGATGACAAAAAGATTGAAGGCTTGAAGAAAAAGAAAGAGCAGTATGAATCGGAGTTGGAAGAGGTAGGATCAATAAGAGATATGCACCTTAAGGAGTCTGAAGCATCTGGAAAAATTAGTGGACTTGAAAAGAAAATTCAATATGCTGAGATTGAGAAGCGAAGCATTGAAGACAAACTTTCAAATTTGAGGCGAGAAAAAGAGATAATCAAAGAAGAAATTGAACGTATCAGCCCAGAACTTCGGAAGTTAAATGATGCTGTTGATAAGAGGAATGCAGAAATACGTAAGCTGGAGAAGAGGATCAATGAAATAACTGATCGGATCTACAAAGATTTCAGCAAGTCGGTTGGGGTTGCTAACATCCGTGAGTATGAAGAAAATCAACTCAAGTCTGCTCAAAATGTAGCAGAAGAGAGGCTAAGCTTGAGTAGCCAGCTTTCAAAATTAAAATATCAATTGGAGTATGAGCAAAATCGGGATATGACTTCACGAATTAGAGAACTGGAGTCTTCTTTAAGTTCTCTAGAACATGATTTAAAACAGGTGCAGAACAAAGAGGCTGAAGCAAAGTTAGCAGCTGAGAAAGCTACTGAAGATATTGATCGGTTGAAGGAAGAAGTTCAGGAGTGGAAATCAAAGTCAGAAGATTGTGAGAAGGATATCCAGGAATGGAAGAAGCGTGCCTCTTCAGCCACAACAAGCATATCTAAACTTAATCGTCAGATAAACTCTAAGGAGGCACAGATTGAGCAGTTGATGGTGCAGAAGCAGGAAATATTAGAAAAGTGTGAACTTGAACAGCTAAGCCTTCCGACTATATCAGATCCAATGGATACCAGTACTTCAACGCCAGGTCCAGTTTTTGACTTTGATCAGCTAAGTAGAACACTGAAGGATAGGAGGCAGCCTGACAGGGACAAAATTGAGGTTGAATTTAAGCAAAAGATGGATGCCCTGACATCTGAAATTGAAAGAACAGCACCGAATTTGAAGGCATTGGATCAATATGAGGCTCTGCTGGAAAAGGAAAGAGCTGTCACTGAAGAATTTGAAGCTGTCAGAAAAGAGGAGAAGGAGAAGACTGATAGGTTCAACACAGTTAAGCAGAAGAGGTATGAGTTGTTCATGGATGCTTTCAACCACATATCTGGTAATATTGATAAAATATACAAACAACTTACAAAAAGCAACACACATCCATTGGGCGGGACGGCATACTTAAACTTGGAAAATGAAGATGATCCATTTCTACATGGCATCAGGTACACCGCTATGCCCCCAACAAAGCGCTTTCGTGACATGGAGCAGCTATCTGGTGGGGAGAAGACTGTTGCTGCACTTGCATTGCTGTTCTCAATCCACAGCTATAAACCTTCACCGTTTTTCATATTGGACGAAGTTGATGCTGCATTGGACAACTTAAATGTTGCCAAGGTTGCTGGATTTATTCGTTCCAAGTCTTGTGAAGGAGCAAGAGCTAGTCAGGATGCTGATGGTAGCAGTGGCTTTCAAAGCATTGTGATATCCTTGAAAGATAGCTTTTATGACAAAGCTGAAGCATTGGTTGGGGTTTACAGGGACTCAGAGAGAAGCTGTTCGAGAACTCTGACATTTGACCTGACCAAATACCGGGAGTCCTAA	3651	0.4125	MPSLISPGKIHRLEMENFKSYKGLQVIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGAQLKDLIYAYDDKEKEQKGRRAFVRLVYQLGNGSEIQFTRTITSSGGSEYRIDGNVVTWDVYNARLKSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKRDYEQFEEEKARAEEKSALVYQKKKTVVMERKQKKEQKEEAEKHLRLQDQLRTIKKEHFLWQLFNIENDIEKTSDDLEDEKRSREGVMEELEKFEAEASKKKKEQAKYLKEIAQCERRIGERSNKLDKNQPELLKLKEEIARINSKIKKGKKELDRKREERRKHAGDITELQRGIRDLTAKLEDLQEKSRDVGDELKLDGSDLEEYFRIKEEAGMKTAKLREEKELLDRQQHADSEVQKNLDENLQQLKNRESELNLQEEQMRTRLKKILDNSTKHKDDLANLKKELRVMQDKHRDSRKKYENLKLKIGEIENQLRELKADRYENERDARLSQAVESLKRLFQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDEKTGKECIKYLKDQRLPPQTFIPLQSVRVKPIIERLRTLGGSAKLVFDCKFDPALEKAILFAVGNTLVCDDLEEAKVLSWSGERFKVVTVDGILLTKSGTMTGGTSGGMEARSKQWDDKKIEGLKKKKEQYESELEEVGSIRDMHLKESEASGKISGLEKKIQYAEIEKRSIEDKLSNLRREKEIIKEEIERISPELRKLNDAVDKRNAEIRKLEKRINEITDRIYKDFSKSVGVANIREYEENQLKSAQNVAEERLSLSSQLSKLKYQLEYEQNRDMTSRIRELESSLSSLEHDLKQVQNKEAEAKLAAEKATEDIDRLKEEVQEWKSKSEDCEKDIQEWKKRASSATTSISKLNRQINSKEAQIEQLMVQKQEILEKCELEQLSLPTISDPMDTSTSTPGPVFDFDQLSRTLKDRRQPDRDKIEVEFKQKMDALTSEIERTAPNLKALDQYEALLEKERAVTEEFEAVRKEEKEKTDRFNTVKQKRYELFMDAFNHISGNIDKIYKQLTKSNTHPLGGTAYLNLENEDDPFLHGIRYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGARASQDADGSSGFQSIVISLKDSFYDKAEALVGVYRDSERSCSRTLTFDLTKYRES	1216

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere02g0806	1216	Gene3D	-	495	577	-	-
	Dere02g0806	1216	Coils	Coil	342	369	-	-
	Dere02g0806	1216	Coils	Coil	1006	1026	-	-
	Dere02g0806	1216	Coils	Coil	708	742	-	-
	Dere02g0806	1216	CDD	ABC_SMC1_euk	10	157	IPR028468	GO:0005524\|GO:0007062\|GO:0008278\|GO:0016887
	Dere02g0806	1216	PIRSF	SMC	8	1212	IPR024704	GO:0005524\|GO:0016887
	Dere02g0806	1216	SUPERFAMILY	Smc hinge domain	481	681	IPR036277	GO:0005515\|GO:0005524\|GO:0005694\|GO:0051276
	Dere02g0806	1216	SMART	SMC_hinge_2	517	632	IPR010935	GO:0005515\|GO:0005524\|GO:0005694\|GO:0051276
	Dere02g0806	1216	Coils	Coil	412	502	-	-
	Dere02g0806	1216	Coils	Coil	828	932	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere02g0806	Dere-ChrDere02	7602930	7618442	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere02g0806	8	112	Structural Maintenance of Chromosomes family	AT5G61460	35.714	7.43e-09	58.5

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere02g0806	02	7602930	7618442	Dere02g0806	02	7602930	7618442	ECH

Showing 1 to 1 of 1 entries