Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0799 ATGGCTAAAGATCAAATACAGGTGCTAAATGCACTGGATGTGGCAAAAACACAATGGTATCATTTCACAGCAATCATCGTTGCGGGAATGGGCTTCTTCACGGACGCATACGATCTGTTCTGCATATCCCTGGTCACCAAGTTACTGGGCCGCGTATACTACCACGTGGACGGTTCGCCCAAGCCCGGAAATTTGCCTCCCAACGTCGCATCTGCTGTGAACGGCGTCGCATTCTGCGGAACCATCACCGGTCAGCTCTTCTTTGGGTGGCTGGGTGACAAACTGGGCCGCAAGAAAGTGTACGGCATGACTCTTATGATGATGGTGTTATGCTCTATTGCTTCAGGTCTGTCTTTTGGACACACACCACAATCTGTGATGGCCACACTTTGCTTCTTCCGATTCTGGCTTGGTTTCGGTATTGGTGGAGACTACCCTCTTTCTGCCACCATCATGTCAGAGTATTCCAGCAAGAAGACTCGGGGTGCCTTCGTTGCTGCAGTTTTTGCGATGCAGGGCTTTGGAATTCTGGCTGCTGGTATGTTTGCAATTATTATCTCAGCTGCTTTCAAGACCAGGTTTGATTCTGCACCTTACGAGGTGGATCCAGATGGCTCAACTGTTCCTCAAGCAGATTTCGTCTGGAGGATAGTTTTAATGGTGGGAGCACTCCCTGCTGCTTTGACTTATTACTGGAGAGCCAAGATGCCTGAGACCGCTCGTTATACTGCTCTTGTTGCTAAGAACACTGAGCAAGCTGCAGCTGATATGTCTAAGGTTCTTCAAGTGGAAATTACAGCTGAACCTCCAAAGGACGAGGGGTCCAAGGCTAAATACGGGTTGTTCTCCAAGGAGTTCATGAGTCGTCATGGGCTTCATTTACTTGGAACAACAAGCACCTGGTTCTTGCTTGACATTGCATTTTACAGCCAAAATCTGTTCCAGAAAGATATCTTCAGTGCTGTCGGTTGGATTCCTCCCGCGGAAACCATGAATGCTCTCGAGGAGATGTTCTTTATCGCAAAGGCTCAAACGCTTATTGCTCTATGCAGTGCTGTTCCGGGGTACTGGTTTACAGTGGCCTTCATTGATAGATTGGGAAGATTTTGGATTCAATTGGGTGGATTCTTCTTCATGACTGTGTTTATGTTTGCTCTTGCCATTCCTTATGACCACTGGACTCGTAGGGAAAACAGAATTGGGTTTGTGGTGATGTATTCCCTCACCTTCTTCTTTGCAAATTTTGGGCCTAATGCTACCACTTTTGTTGTGCCGGCAGAGGTTTTCCCGGCTAGATTCCGATCTACGTGCCATGGGATATCATCGGCGTCTGGAAAGTTAGGGGCCATTGTTGGTGCATTCGGATTCTTGTATTTGGCACAGAACAAGGACAAGAGCAAGGCAGATGCAGGGTACCCTGCGGGTATTGGAGTAAAGAATGCGCTTATAGTGTTGGGCGTGATCAACATTTTGGGATTTTTCTGTACTTTCTTGGTGCCTGAGACAAAGGGAAAATCTTTGGAGGAGATATCTGGTGAGAATGAAGATGAAGATGGAACCAGAGCCAATTCAGGCTAG 1578 0.4747 MAKDQIQVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRVYYHVDGSPKPGNLPPNVASAVNGVAFCGTITGQLFFGWLGDKLGRKKVYGMTLMMMVLCSIASGLSFGHTPQSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSSKKTRGAFVAAVFAMQGFGILAAGMFAIIISAAFKTRFDSAPYEVDPDGSTVPQADFVWRIVLMVGALPAALTYYWRAKMPETARYTALVAKNTEQAAADMSKVLQVEITAEPPKDEGSKAKYGLFSKEFMSRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPPAETMNALEEMFFIAKAQTLIALCSAVPGYWFTVAFIDRLGRFWIQLGGFFFMTVFMFALAIPYDHWTRRENRIGFVVMYSLTFFFANFGPNATTFVVPAEVFPARFRSTCHGISSASGKLGAIVGAFGFLYLAQNKDKSKADAGYPAGIGVKNALIVLGVINILGFFCTFLVPETKGKSLEEISGENEDEDGTRANSG 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0799 525 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 508 - -
Dere02g0799 525 Pfam Sugar (and other) transporter 26 511 IPR005828 GO:0016020|GO:0022857|GO:0055085
Dere02g0799 525 FunFam Inorganic phosphate transporter 1-6 20 524 - -
Dere02g0799 525 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 504 IPR020846 GO:0022857
Dere02g0799 525 NCBIfam phosphate:H+ symporter 11 513 IPR004738 GO:0005315|GO:0006817|GO:0016020
Dere02g0799 525 Gene3D MFS general substrate transporter like domains 20 524 IPR036259 -
Dere02g0799 525 CDD MFS_PhT 25 503 - -
Dere02g0799 525 SUPERFAMILY MFS general substrate transporter 11 511 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0799 Dere-ChrDere02 7558765 7560342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0799 1 518 Inorganic Solute Cotransporters AT3G54700 81.467 0.0 891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3119 01 45675610 45676368 Dere02g0799 02 7558765 7560342 CCT
Dere02g0799 02 7558765 7560342 Dere02g0799 02 7558765 7560342 ECH