Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0797 ATGGAGGGAGAGAGAAGTGAGAATGGAAGGGGAAAGGGAGAGGTGAGATACAGAGGAATACGAAGGAGGCCATGGGGTAAGTATGCGGCAGAGATTCGTGATCCTACCCGAAAAGGGACTCGCATTTGGCTCGGAACCTTCGACACTGCCGAGGAAGCTGCCAGGGCTTACGATGCTGCTGCTTTTCATTTCAGGGGCCACAGAGCCATTCTCAATTTCCCAAACGATTACCAGTCTCATCATTCTTCTTCCTTGCCTCTGCCTCTGCCTCTGCCTACGACCTCTTCTTCTGATCATTCCTCTGCACTCCCTCAGCCTCATCCTACTCTGGAGTTCGAGTACTTGGACAACAACTTGCTCGATGAACTCCTACAACCCCAGGATTACTGCCACCCCAAGCCAACTACCTTCTGA 414 0.5193 MEGERSENGRGKGEVRYRGIRRRPWGKYAAEIRDPTRKGTRIWLGTFDTAEEAARAYDAAAFHFRGHRAILNFPNDYQSHHSSSLPLPLPLPTTSSSDHSSALPQPHPTLEFEYLDNNLLDELLQPQDYCHPKPTTF 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0797 137 Pfam AP2 domain 16 67 IPR001471 GO:0003700|GO:0006355
Dere02g0797 137 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Dere02g0797 137 MobiDBLite consensus disorder prediction 77 108 - -
Dere02g0797 137 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Dere02g0797 137 PANTHER DNA-BINDING DOMAIN 11 121 IPR044808 GO:0003700|GO:0009873
Dere02g0797 137 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Dere02g0797 137 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Dere02g0797 137 CDD AP2 16 76 IPR001471 GO:0003700|GO:0006355
Dere02g0797 137 Gene3D AP2/ERF domain 15 75 IPR036955 GO:0003700|GO:0006355
Dere02g0797 137 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Dere02g0797 137 MobiDBLite consensus disorder prediction 77 104 - -
Dere02g0797 137 FunFam Ethylene-responsive transcription factor 2 15 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0797 Dere-ChrDere02 7535971 7536384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0797 14 128 AP2-EREBP Transcription Factor Family AT3G23230 53.333 3.67e-37 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere02g0797 AP2 3e-15 CL0081