Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0796 ATGAGTTCGTTCTCTTTTGAGCAGCCTGCAGATTGGGAGATGTGGGAAGAGCCTTCAGGTACTTTGCTGGATACATATGATTGGAGGAGTGGCGCTGATAATGGTGAGCTCGATTGCCTTTCCTTCGACATGGTAGACTTGTCGAAAGATGGAGAGGCTGCAAGGGAGGAGGGAAGAGAAACAATGGGGAAGAGGGAAGTAGAGGAGGAAGGTGGTATCACTAACAAGGAAAAGTCATACATAGGGGTAAGAAGAAGGCCATGGGGAAAATTTGCAGCAGAGATCAGAGATACGACGAGGAATGGAGCGAGGGTATGGCTGGGAACCTTCGAAACTGCAGAGGAAGCAGCCTTAGCGTATGATCAAGCTGCATTTTCCATGAGAGGATCCTCTGCTATTCTTAATTTTCCAATGGAAAGGGTGAGACAGTCTCTGAAGGACCAACACATCAATTATGGTTGCGCCAGAGGGTCTTCCCCTGCATTGCAGCTCAAGGAGAAGAACTATATCCAACGCAAATTGACAGCAAGAGCTAGGAAATTAAGCAAACCCAAGCTCCCTTCACATTCACAGGCTTCCACCGATAACGTGGTGGTCCTCGAGGACTTGGGGGTTGAATATCTTGAGCAGCTTCTCGCCATATCAGATCAAACTCCTGGCCCTAGCTAG 669 0.4843 MSSFSFEQPADWEMWEEPSGTLLDTYDWRSGADNGELDCLSFDMVDLSKDGEAAREEGRETMGKREVEEEGGITNKEKSYIGVRRRPWGKFAAEIRDTTRNGARVWLGTFETAEEAALAYDQAAFSMRGSSAILNFPMERVRQSLKDQHINYGCARGSSPALQLKEKNYIQRKLTARARKLSKPKLPSHSQASTDNVVVLEDLGVEYLEQLLAISDQTPGPS 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0796 222 PANTHER DNA-BINDING DOMAIN 66 213 IPR044808 GO:0003700|GO:0009873
Dere02g0796 222 CDD AP2 78 137 IPR001471 GO:0003700|GO:0006355
Dere02g0796 222 Pfam AP2 domain 79 129 IPR001471 GO:0003700|GO:0006355
Dere02g0796 222 SMART rav1_2 79 143 IPR001471 GO:0003700|GO:0006355
Dere02g0796 222 Gene3D AP2/ERF domain 78 139 IPR036955 GO:0003700|GO:0006355
Dere02g0796 222 SUPERFAMILY DNA-binding domain 79 139 IPR016177 GO:0003677
Dere02g0796 222 ProSiteProfiles AP2/ERF domain profile. 79 137 IPR001471 GO:0003700|GO:0006355
Dere02g0796 222 MobiDBLite consensus disorder prediction 51 71 - -
Dere02g0796 222 PRINTS Ethylene responsive element binding protein signature 80 91 IPR001471 GO:0003700|GO:0006355
Dere02g0796 222 PRINTS Ethylene responsive element binding protein signature 103 119 IPR001471 GO:0003700|GO:0006355
Dere02g0796 222 FunFam Ethylene-responsive transcription factor 2 78 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0796 Dere-ChrDere02 7513363 7514031 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0796 77 218 AP2-EREBP Transcription Factor Family AT3G23240 62.676 1.86e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere02g0796 AP2 1.4e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g0796 02 7513363 7514031 Dere02g0796 02 7513363 7514031 ECH