Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0795 ATGGGACTTGAGGTGACACTGAATAAGGCATCCATCCATCCACGTACAATGAATGATGAATCAATCTCTATCAGGGCAGATATAAAAAAAGAAGGGGAGGGTAAAGACAGAGAAGAGAAGAGGAAGAAGATGCAAGGTGAAGGAAAGGGAAGGAGATACAGAGGAGTGAGAAGGAGGCCATGGGGGAAGTTTGCTGCACAGATTAGGGACTCCAACAGGAGTGGAGCAAGATTGTGGCTTGGAACATTTCAGACTGCGGAGGAGGCTGCCAGAGCATATGATCGAGCTGCGTTTCAGATGAGAGGTGTTTCCGCCATTCTCAACTTTCCAAACGAGTATCCCCCTTCATCGTCATCCTCTTCTTCTTCCACGTTCAAAACCCAGCCTGCTAAACTAGTGTTCGAGTTTCAGTGCATGGATGAAAATTTGTTGGAGCAACTTCTTGACTGTGATCACACTGGCATCACCAACGTCCACAAGTCCTAG 486 0.4712 MGLEVTLNKASIHPRTMNDESISIRADIKKEGEGKDREEKRKKMQGEGKGRRYRGVRRRPWGKFAAQIRDSNRSGARLWLGTFQTAEEAARAYDRAAFQMRGVSAILNFPNEYPPSSSSSSSSTFKTQPAKLVFEFQCMDENLLEQLLDCDHTGITNVHKS 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0795 161 SMART rav1_2 52 116 IPR001471 GO:0003700|GO:0006355
Dere02g0795 161 MobiDBLite consensus disorder prediction 18 56 - -
Dere02g0795 161 PANTHER DNA-BINDING DOMAIN 38 122 IPR044808 GO:0003700|GO:0009873
Dere02g0795 161 ProSiteProfiles AP2/ERF domain profile. 52 110 IPR001471 GO:0003700|GO:0006355
Dere02g0795 161 FunFam Ethylene-responsive transcription factor 2 51 111 - -
Dere02g0795 161 PRINTS Ethylene responsive element binding protein signature 53 64 IPR001471 GO:0003700|GO:0006355
Dere02g0795 161 PRINTS Ethylene responsive element binding protein signature 76 92 IPR001471 GO:0003700|GO:0006355
Dere02g0795 161 Pfam AP2 domain 52 102 IPR001471 GO:0003700|GO:0006355
Dere02g0795 161 Gene3D AP2/ERF domain 51 111 IPR036955 GO:0003700|GO:0006355
Dere02g0795 161 SUPERFAMILY DNA-binding domain 52 111 IPR016177 GO:0003677
Dere02g0795 161 CDD AP2 60 111 IPR001471 GO:0003700|GO:0006355
Dere02g0795 161 MobiDBLite consensus disorder prediction 20 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0795 Dere-ChrDere02 7507034 7507610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0795 47 151 AP2-EREBP Transcription Factor Family AT3G23230 54.918 1.58e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere02g0795 AP2 5.5e-15 CL0081