Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0794 ATGGCTACTTCAGACTCAGCTTTACCCGTATTCGCCATTGTTGTGCTCAGCATCATGGCCACGGCTTTCTTGCTCATCGGCTACTTCACTTTTGTTACCAAATGCTGCTCTAACTGCCACCAACTTAACCCACTCACATGGCTTTCCATTCTGCGGGCAAGACACAGTGAAGAACCCTTCATAGCTCTCTCCCCCACCATGTGGAATCGAGGGCTCGATGAATCTGCCATCCGAGAAATACCAACATTCCAGTTCGTGAAAGGTGAGGATCATGCCAGTAGTGCCAGTACTGTGTATGGGTGCGTGGTGTGTCTGAATGAGTTTCAAGAACAAGACATGCTCAAAGTTCTACCCAAATGCGCCCATGCCTTTCACTTGGATTGTATTGACATTTGGCTTCAGAGCAACGCCAATTGTCCTCTCTGTAGATCAAGCATTTCAGGCATCACTCGTTGTCCAATGGATCATATCATAGCCCCAAGCTCTTCTCCTCAAGATTCTCAATTACTCTCCAATATGGGTAGTGATGAAGATTTTGTGGTCATAGAATTGGGAGGTGAAGATGGGGGATCCTTGTCACAGAGGCAACAAGAAAGAAATGAGTCAAACAGGGGAAGCTTAGCACAGAGCAGAAGCCACTCTACGAGGAAGATGGAGCACAAGCTGGGGCACTTGAAACCAAGGAAGTGGCACCATGTGTCCATCATGGGAGACGAGTGTATTGATGTGAGGAAGAAAGATGAGCAGTTTTGTATTCAACCCCTTAGAAGATCTTTCTCGATGGATTCTGCAAATGATAGACAAGTTTACTTGGAAATCCAAGCCATTACAAGGCAGCCAAATCGGCATCAAAACGAGGCAAGCGGGAGCGAAGATAGTAATAGTAATGGCAGAGGTCGAAGGTCTTTCTTTCCATTTCGTTATGGTCGGGGCTCAAAAAATGCAGTGCTTCCTCTGGAGAATGAGGTTTGA 972 0.465 MATSDSALPVFAIVVLSIMATAFLLIGYFTFVTKCCSNCHQLNPLTWLSILRARHSEEPFIALSPTMWNRGLDESAIREIPTFQFVKGEDHASSASTVYGCVVCLNEFQEQDMLKVLPKCAHAFHLDCIDIWLQSNANCPLCRSSISGITRCPMDHIIAPSSSPQDSQLLSNMGSDEDFVVIELGGEDGGSLSQRQQERNESNRGSLAQSRSHSTRKMEHKLGHLKPRKWHHVSIMGDECIDVRKKDEQFCIQPLRRSFSMDSANDRQVYLEIQAITRQPNRHQNEASGSEDSNSNGRGRRSFFPFRYGRGSKNAVLPLENEV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0794 323 MobiDBLite consensus disorder prediction 277 306 - -
Dere02g0794 323 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 148 IPR013083 -
Dere02g0794 323 MobiDBLite consensus disorder prediction 277 300 - -
Dere02g0794 323 SUPERFAMILY RING/U-box 100 149 - -
Dere02g0794 323 Pfam Ring finger domain 101 143 IPR001841 -
Dere02g0794 323 CDD RING-H2_EL5-like 101 143 - -
Dere02g0794 323 MobiDBLite consensus disorder prediction 190 212 - -
Dere02g0794 323 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Dere02g0794 323 PANTHER RING-H2 FINGER PROTEIN ATL16 4 320 IPR044600 GO:0016567|GO:0016740
Dere02g0794 323 MobiDBLite consensus disorder prediction 189 226 - -
Dere02g0794 323 FunFam E3 ubiquitin-protein ligase ATL6 62 148 - -
Dere02g0794 323 SMART ring_2 101 142 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0794 Dere-ChrDere02 7487746 7488717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0794 2 283 C3H Transcription Factor Family AT1G04360 45.631 2.62e-78 242