Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0790 ATGGCGACGAACATGCATCAATTACTCAGAAGCCTCTGTTTAAATACTGATTGGAAGTACGCCATCTTTTGGAAACTCAAACATCGTGCTCGGATGATCTTGACATGGGAGGATGGATATTTTGACAATCCTGATAATTATGACTCTTTAGATAATGGCTGCTGCCAGAAGACCTTGGACCAGATTCACAGTGGGCAATTTTCCCACGACCCTCTTGGGTCAGCGGTGGCAAAGATGTCATATCATGTATACGCGCTAGGGGAAGGTGTTGTTGGACAGGTAGCTGTTACCGGAAAGCATCAGTGGATCTTTGCTGATGATGCTACAGTTTCTGCTTCATCATTTGAGTTTGCTGATGGGTGGCAATCTCAGTTTTCTGCAGGAATTAGGACAATTGTTGCTGTGGCTATAGTCCCACTTGGAGTTGTTCAACTTGGCTCTTTGAATAAAGTAATAGAAGATACGAGGGTTGTAACTTATATCAGAAATATATTTTTGGCTACTCAAGATTACTCGATAGGCCATGGTCCTAGTCATATACAGAGTAGTCTGGAGAATTCTTCATCTCTGCCAGATGTTTCAACGACAAAATTGTCTTCAGAAATTATACCTGCTTGCTTACACAATACGGAGGAAATCACATTGAGTGAAAAATTGGATATTTTGTTACCCTTTCCATGTTCTGGGAAGAACTTTCCTCCTCCTTCTGTTTGTCAGAAAATGGCTGTTGATGTTGCCAAGCATGGAGGACCTGAGTTTTGCAGTGATGAAAGTTCGGTTTTGCTTAAGTTAGTATCAAATATGATTAATGTGGAGCATCATAAATCTGTAGATCTGAGACCTCTAAATGAGAGGAAATATGAAGGGGGCAGTAGTGGCTGTAAAGATAATAGGGTGGAATCAGAAGAAAATGTCACATCATTGCTACACAATTCAGCTATGAATAATAATAGCCTCAGTCATTTAATATGTCCATCAGAAAAATTTGGAGCTGATTTTGACTGCTTCTCTTCAGACTTTGTTGATGTTGTTTGTAAAAGTGATACGTTACATCATTTAAATATTTATCAGAAAGAGGCGTTGACTGTTCCCAGACCTTCAAATGCAACATTCCAAGAGGATACAGAAATGTCAGAACTTCAGATTGAGCCTCATTACAAGAGTACCTCGAATACATTGTTAAAGTTCCCTGCTGGTTGTGAGCTACATGAAGCCCTTGGGCCTGCTTTTCTAGAAAGGAGTAGATATATTGATTCGGAGGCACAGGTGAATCAAGATGTTAAAACTATGGAGATGCCAGATGAGATTAGCTGTAGCCAGTTGACTTGTGAATCTCGTCCGGAGCATCTTTTGGAAGCAATAGTGGCCAATGTTTGTCATAGTAGTAATGACGTTAAGAGTGAACTATCATATTCAACATCAGGGCAGTCTGCCATGGTATCTGAAAGAAACCCTGAAGCTTCCGTTCACACTGCCCACACTATTAATTCAGGTGGTTGTTCAATAGATCAGTCTTCTCTTGTCAGGGAGGACATATACCACTCTTTGACTTCATCTGGGATTTGTGGAACGATGTCCCTCAAAGGTGTTTCGTCAACATGTCCTAGTTCATGTAGTGAACAGTTTGAAAGGTCTTCTGAACCAGGTAAGAACAAGAAGAGGGCTAGGCCTGGGGAAAGTTGTAGGCCTAGGCCAAGGGACAGACAACTGATCCAAGATCGTATTAAGGAGTTGAGAGAACTGGTGCCATATGGGGCGAAGTGCAGCATCGATTCACTACTGGAGCGCACAATAAAGCACATGCACTTTCTGCAGAGCATAGCTAAGCATGCTGACAAGCTAAATAAATTTGCTGATTCAAAGACAAAGTTGCTTCACATGGAATCAGCTATTCCTGGATCCTCTAGTAGTGAACAGGGTACAAGTTGGGCAATGGAAGTAGGTGGTCATTTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAATGGGCAGATGCTTGTTGAGATGCTGTGTGAGGAGTGCAGCCATTTTTTGGAGATAGCAGAAGCCATAAGGAGCTTAGGCCTGACAATTTTGAAAGGTGCAACAGAAGCTCATGGCGAGAAGACATGGATATGTTTTGTGGTGGAGGGCCAAAACGACAGAAATTTACACAGATTAGATATCTTATGGCCGCTTGTTCAAATACTGCAGTCCAAGAGTACAATGAATTCACTGTAA 2226 0.4155 MATNMHQLLRSLCLNTDWKYAIFWKLKHRARMILTWEDGYFDNPDNYDSLDNGCCQKTLDQIHSGQFSHDPLGSAVAKMSYHVYALGEGVVGQVAVTGKHQWIFADDATVSASSFEFADGWQSQFSAGIRTIVAVAIVPLGVVQLGSLNKVIEDTRVVTYIRNIFLATQDYSIGHGPSHIQSSLENSSSLPDVSTTKLSSEIIPACLHNTEEITLSEKLDILLPFPCSGKNFPPPSVCQKMAVDVAKHGGPEFCSDESSVLLKLVSNMINVEHHKSVDLRPLNERKYEGGSSGCKDNRVESEENVTSLLHNSAMNNNSLSHLICPSEKFGADFDCFSSDFVDVVCKSDTLHHLNIYQKEALTVPRPSNATFQEDTEMSELQIEPHYKSTSNTLLKFPAGCELHEALGPAFLERSRYIDSEAQVNQDVKTMEMPDEISCSQLTCESRPEHLLEAIVANVCHSSNDVKSELSYSTSGQSAMVSERNPEASVHTAHTINSGGCSIDQSSLVREDIYHSLTSSGICGTMSLKGVSSTCPSSCSEQFERSSEPGKNKKRARPGESCRPRPRDRQLIQDRIKELRELVPYGAKCSIDSLLERTIKHMHFLQSIAKHADKLNKFADSKTKLLHMESAIPGSSSSEQGTSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGATEAHGEKTWICFVVEGQNDRNLHRLDILWPLVQILQSKSTMNSL 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0790 741 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 568 618 IPR036638 GO:0046983
Dere02g0790 741 MobiDBLite consensus disorder prediction 540 567 - -
Dere02g0790 741 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 165 IPR025610 -
Dere02g0790 741 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 555 604 IPR011598 GO:0046983
Dere02g0790 741 MobiDBLite consensus disorder prediction 545 567 - -
Dere02g0790 741 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 739 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0790 Dere-ChrDere02 7464754 7470921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0790 1 736 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 42.003 9.50e-174 514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3142 01 46055442 46059068 Dere02g0790 02 7464754 7470921 CCT
Dere02g0790 02 7464754 7470921 Dere02g0790 02 7464754 7470921 ECH