Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0785 ATGACTGGTTCAGGTTCTCCTTGTGGAGCCTGCAAATTCTTGAGAAGAAAATGTGTGAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAGCAAGGTGCTACCCATTTTGCAGCCATTCATAAGGTCTTTGGTGCAAGCAATGTCTCCAAGCTCCTCGCCCACCTCCCTGTAAGTGACCGTTGTGAAGCCGCCGTCACAATCTCCTACGAAGCTCAAGCAAGGCTTCAGGATCCCATTTATGGCTGTGTTTCCCATATCTTCGCCCTTCAACAGCAGGTGGTCAATTTACAAGCACAGCTAGCTTATCTCAAGGAACAAGCAGCCCAGAGCTTTCTCAATGCCTCTGCCATTGGAAACCCTAATGAAAAGTACTCTGAAAAACCTACTGCTTTACCTCATGATCTTCAAGCTTGGTTCCAGACGGAAAATTTCAACATGGGGCCTCAATTTCTTCATAACTTGTCTAATAATTCCTCAACAAACTATGCTAGTAGTAGTTCTACTTTCATGAATCCAAACCCTCTAGGGAATTATGAAAATTCAGGAACCCTGGAAGAAAGCATCTCTTTTTCTAGCTTTGATGAGACTACTTCTAACTCCATGTCCTATGACATGCAAGCTAACAGCAAGCAGTGGGGCTTCCATGAAATGGATGACCTTCAATCGGTGGCTTTTGGTTTCAGTCGATCGGCTTCGTGA 702 0.4459 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLKEQAAQSFLNASAIGNPNEKYSEKPTALPHDLQAWFQTENFNMGPQFLHNLSNNSSTNYASSSSTFMNPNPLGNYENSGTLEESISFSSFDETTSNSMSYDMQANSKQWGFHEMDDLQSVAFGFSRSAS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0785 233 Coils Coil 87 107 - -
Dere02g0785 233 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Dere02g0785 233 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 212 - -
Dere02g0785 233 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0785 Dere-ChrDere02 7396085 7396910 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0785 7 141 AS2 family AT3G58190 74.638 2.06e-71 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere02g0785 LOB 5e-36 No_clan