Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0782 ATGTACTACGTGCTGCCACTATCTAAATTTGAGAACAAAGAGTTAAAACATGAGGACAAGGACAAACTACAAATGGCAAATTCTTTTTCACTTACTTCACTTCATTCTTGTCCCTGCAGGAAGGTTCCTGCATGTTTCCAAGCAAATATTATGATGGGTGAAACTCTTTTAAGTCCTGATAGCATACTATTTTCTGTAGTTTCCATTCTTGTGTCATCACAGGTAATGCCTATGTGCTTCCTTTGTCCCTTGCTTAAACCATCTATAATACCCTCTCCCCTCTCTCTTTCATTATCAAAATTCAATCTCATGGCATTCAAGTACCCAGAGGAGTCCAAGAGCTCCAGCGAAGAAACCGATCGATCCGATGATACGGGAATTGGGAGATCCTACGAGTGTGTGTTTTGCAAGAGAGGTTTCACTACGGCACAAGCTTTGGGAGGACACATGAATATACACAGGAAGGATAGAGCCAAAACGAAGCCCAGTTTTGGTCCTTCAACTTCAAGCAAAGTCGCTGATCTCGGGTTCTATTCAGCACGTCCTGGGAATTACCATTCAACTGCTATTCCTGAGGTTGATAGTAATTGCCCTCAATTTTATTATCCCAGTACAATCAGATCATCTTGGCATGTACAGTATGCAGATCGGGACGTGTTTGGAGAAGACTGGAGGAGAAAGAGTTTGAGCTTGTATACTAATCCATTCTGCGTACGTGACAAGGTACAAGATAACACTCAAGAGGATGGACTGGATTTGGAGCTTCGACTGGGTTATCCACCATAG 786 0.4249 MYYVLPLSKFENKELKHEDKDKLQMANSFSLTSLHSCPCRKVPACFQANIMMGETLLSPDSILFSVVSILVSSQVMPMCFLCPLLKPSIIPSPLSLSLSKFNLMAFKYPEESKSSSEETDRSDDTGIGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKTKPSFGPSTSSKVADLGFYSARPGNYHSTAIPEVDSNCPQFYYPSTIRSSWHVQYADRDVFGEDWRRKSLSLYTNPFCVRDKVQDNTQEDGLDLELRLGYPP 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0782 261 Gene3D Classic Zinc Finger 111 174 - -
Dere02g0782 261 Pfam C2H2-type zinc finger 131 155 - -
Dere02g0782 261 PANTHER OS07G0101800 PROTEIN 112 260 - -
Dere02g0782 261 ProSitePatterns Zinc finger C2H2 type domain signature. 133 153 IPR013087 -
Dere02g0782 261 ProSiteProfiles Zinc finger C2H2 type domain profile. 131 158 IPR013087 -
Dere02g0782 261 SUPERFAMILY beta-beta-alpha zinc fingers 129 158 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0782 Dere-ChrDere02 7371610 7373610 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0782 112 219 C2H2 Transcription Factor Family AT3G09290 36.111 3.18e-14 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dere02g0782 None None None