Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0774 ATGGCTGAGAAATTATGTGTGAACGAAGAAGGAAAGGCTATGTTGGAATCTGTGTTGGGTGCCGAAGCTGTCGCGTTCTTTATCTCAGCGATTTCCAATAATGTCTTTACCGACGTTATTGTTCCATCTGGCGGTGACTTGGGTCTCCAGCAGAGATTGTCCCAGATTGTTGAAGTGTCCAAGTACAACTACGCCGTCTTTTGGCAGGTTGCGGGCTTGAAATCTGGTGGCTCTGCATTGGTATGGGGCGATGGGTTTTGTCGGGATCCCAAAGGGGGTGATCTGAATGGAGTTGGCAAGGAGAAGGAGGAGGTGAACAGGCGGGTGTTGCAGAAGCTTCGTGCCTGCTTTGGTGGTTCAAAAGAGGCTGATTGTGCGAGATCGGATAGGGTCTCAGATTTGGATATGTTTTACTTAACTTCGATGTATTATATATTTGGTTTTGATTCGCCGTTTGGCCCCGGAAGTTCATTCAAGTCTAGTAAATCAATTTGGGCTTCTGACATTTCTAATTGTTTGAATCAATATGAATCAAGATCATTTCTTGGAAAAATGGCTGGTATTCAAACAGTTGTTTTTGTACCTCTGAAATCTGGGGTTGTTGAGCTTGGTTCAAAGGAAATGATGCCTGAAGAGCAGAGTGTTCTGGAGATGGTCAGAACAACATTTGGGGAACCTAATTCTGCACAGGCAAAGGTGTTTCCAAAGATTTTTGGGCGCGAACTGAGCCTTGGGGATACTAAATCTCAGTCCATAACAATTAGTTTCTCTCCCAAGGTGGAAGATGATTCTGGTTTCACTTCAGACTCATATGAAGTACAGGCGCTAGGGACTAACCATGTTTATGGAAATTCTTCCAATGGGAATATAGGTGACAATAACGAAGCAAAACTGTTCCCACAACTAAACCAAATGATTGGTGGGAATTTCAGTGCTCAAGCAAGGGTCTCTTGTCTGGACCTAGGTAATGAAGAGTTATCTCCTCATCCAGATGAACGAAAGCCCAGAAAAAGAGGCAGAAAACCTGCCAATGGTAGAGAGGAACCGCTGAACCATGTTGAAGCAGAGAGACAGAGACGGGAGAAGCTTAACCAGAGGTTCTATGCCTTACGAGCTGTTGTTCCAAACATATCTAAAATGGACAAGGCGTCTCTGCTTGGTGATGCTATTACCTATATCACTGATTTGCAGATGAAGATCAAGGTGTTGGAAGCTGAAAAGGGGATGATGAACAATAAGGACAAGCAGTTGCCATTGACAGATATTGATTTTCAGGATAGACAGGACGATGCAGTTGTGAGAGTTAGCTGCCCATTGGATACCCATCCTGTTTCTGGAATTGTTAAAACGTTGAGAGACCATCAAATTGTGGCTCAAGAGTCCAGTGTTTCAACTGCAGATGATAGGGTCGTTCATACATTCTCTATAAAAACTCATGGTGGGGAGGGTGCTGCTATACAGTTGAAGGAGAAGCTTGAAGCCTCCCTATTTAAAGACTGA 1500 0.44 MAEKLCVNEEGKAMLESVLGAEAVAFFISAISNNVFTDVIVPSGGDLGLQQRLSQIVEVSKYNYAVFWQVAGLKSGGSALVWGDGFCRDPKGGDLNGVGKEKEEVNRRVLQKLRACFGGSKEADCARSDRVSDLDMFYLTSMYYIFGFDSPFGPGSSFKSSKSIWASDISNCLNQYESRSFLGKMAGIQTVVFVPLKSGVVELGSKEMMPEEQSVLEMVRTTFGEPNSAQAKVFPKIFGRELSLGDTKSQSITISFSPKVEDDSGFTSDSYEVQALGTNHVYGNSSNGNIGDNNEAKLFPQLNQMIGGNFSAQARVSCLDLGNEELSPHPDERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIKVLEAEKGMMNNKDKQLPLTDIDFQDRQDDAVVRVSCPLDTHPVSGIVKTLRDHQIVAQESSVSTADDRVVHTFSIKTHGGEGAAIQLKEKLEASLFKD 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0774 499 FunFam Transcription factor bHLH13 340 414 - -
Dere02g0774 499 PANTHER MYC 38 495 IPR045084 GO:0003700|GO:0006355
Dere02g0774 499 Coils Coil 393 413 - -
Dere02g0774 499 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 49 223 IPR025610 -
Dere02g0774 499 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 347 396 IPR011598 GO:0046983
Dere02g0774 499 MobiDBLite consensus disorder prediction 322 358 - -
Dere02g0774 499 Gene3D - 340 413 IPR036638 GO:0046983
Dere02g0774 499 MobiDBLite consensus disorder prediction 325 358 - -
Dere02g0774 499 CDD bHLH_AtAIB_like 344 413 - -
Dere02g0774 499 SMART finulus 353 402 IPR011598 GO:0046983
Dere02g0774 499 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 350 415 IPR036638 GO:0046983
Dere02g0774 499 Pfam Helix-loop-helix DNA-binding domain 351 397 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0774 Dere-ChrDere02 7290622 7292121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0774 1 496 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 49.702 4.83e-164 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere02g0774 bHLH-MYC_N 8.2e-40 CL0161