LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere02g0762	ATGGTTTGCGAGATTTCTCACAGCCAAGCAAAGTCCTCTCTTTCACACCTTTCAATTTCAAAACGATGGAAGAAGAATCTAGGGTTTGATAGTACCAAGTCCATCAAGAGTTGGCTAGAACCAAATATGGAGGAGGTTGAAGAAGCTAACAGAGCAGCTGTTGAAAGCTGCCATAGAGTTCTAAGCTTGTTGTCTGAGCCCAAGGATCAGGTTCTCTATACCAATTTAATGGTGGAAACTGGGGAGGCTGTGTCCAGATTCAAGAAAGTTGTCTCCTTGCTCAATAACGGTTTGGGTCATGCAAGAGTGAGGAAGCTCAAAAACAAAAAACTTCAAATCCCTTTTCCCCAAAGTATCCTTTTAGACAATCCAACTTGTAAAACAAACCATTATGCCAAAAATCTGCTGTCTCTGCAAACGGGCTTTTCCGACAATTCAATTCAGGAGTCGGGTTCAAACCTCGGAAGCTCACTCTGTCTGGGAAACCCATCCTTGGAATTGAGCTCAAATGGGAAAAATCCCCTTCACCTTACCCCACAAGCGTCATCACCGCAATATCACCTCCTTCAGCAGCAGCAGCAGCAGCAAAGAATACTGCTACAACAGCAACAAATGAAAAACCAAGCAGAAATGATGTTTCGAAGGAACAATAGTGGAATCAATCTGAATTTTGATAGCTCTAGCTGCACACGAACAATGTCATCTACTAGGTCTTTCATTTCTTCCTTGAGCATAGATGGAAGCGTAGCTAACTTGGATGGGAGTGCCATCCATATAATAGGAGCTCCACACTCTTCAGATCAGAATTCACAACAGCATAAGAGAAAATGTTCTGGCAGAGGAGACGAGGGGAGCGTGAAATGTTGGAGCAGTGCTAGATGCCATTGCTCAAAGAAGAGAAAGCATAGAGTGAAGAGGTCAATCAAGGTGCCTGCTATTAGCAACAAGCTTGCTGATATCCCACCGGATGATTATTCATGGAGAAAATATGGGCAGAAGCCAATCAAAGGCTCCCCTCACCCTAGAGGATACTACAAGTGCAGCAGCATGAGAGGCTGCCCTGCAAGGAAGCATGTGGAGAGGTGCTTGGAAGACCCTTCAATGCTAATTGTTACCTATGAAGGTGAGCATAACCACCCTAGGATACCAGCACAATCTGCAAATGCATGA	1170	0.4436	MVCEISHSQAKSSLSHLSISKRWKKNLGFDSTKSIKSWLEPNMEEVEEANRAAVESCHRVLSLLSEPKDQVLYTNLMVETGEAVSRFKKVVSLLNNGLGHARVRKLKNKKLQIPFPQSILLDNPTCKTNHYAKNLLSLQTGFSDNSIQESGSNLGSSLCLGNPSLELSSNGKNPLHLTPQASSPQYHLLQQQQQQQRILLQQQQMKNQAEMMFRRNNSGINLNFDSSSCTRTMSSTRSFISSLSIDGSVANLDGSAIHIIGAPHSSDQNSQQHKRKCSGRGDEGSVKCWSSARCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPRIPAQSANA	389

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere02g0762	389	Gene3D	WRKY domain	307	382	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Dere02g0762	389	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	44	387	IPR044810	GO:0003700
	Dere02g0762	389	FunFam	WRKY transcription factor 65	305	382	-	-
	Dere02g0762	389	Pfam	Plant zinc cluster domain	274	319	IPR018872	-
	Dere02g0762	389	SUPERFAMILY	WRKY DNA-binding domain	319	381	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Dere02g0762	389	MobiDBLite	consensus disorder prediction	262	282	-	-
	Dere02g0762	389	Pfam	WRKY DNA -binding domain	323	380	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Dere02g0762	389	ProSiteProfiles	WRKY domain profile.	316	382	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Dere02g0762	389	SMART	WRKY_cls	321	381	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere02g0762	Dere-ChrDere02	7143123	7145438	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere02g0762	43	386	WRKY Transcription Factor Family	AT2G30590	55.091	9.90e-126	365

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Dere02g0762		WRKY	1.8e-26	CL0274