Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0732 ATGGAGCTAACAGGGCAGCCCACCGAGGCGAGCCCGGAATGGATGAACAAGGGGGACAACGCGTGGCAGCTGACGGCGGCGACTCTGGTGGGGCTGCAGAGTATGCCGGGGCTCGTTATCCTCTACGGCAGCATAGTGAAGAAGAAATGGGCCATTAACTCGGCCTTCATGGCCCTCTATGCTTTTGCAGCCGTACTGTTTTGTTGGATCGGATGGGCCTATTCGATGTCTTTCGGGGAACGTATGTTTCCGTTTCTGGGACGTCCAAACATCGCCTTGGACCAAAAATTCCTTTTACGCCAAACCTTCTCCGGAAACTTTCCCAACGCCACCATGATATACTTTCAGTTCGTTTTCGCCGCCATTACGTTGATTCTGATCGCCGGCGCGTTGCTTGGAAGAATGAACTTTTATGCGTGGATGTTGTTTGTGCCACTCTGGGTCACTTTGTCGTACACCATATGTGCCTTCAGTATATGGTGCCCGGATGGATGGTTATTCAGAATGGGCCTCATTGATTACTCCGGAGGCTTTGTTATTCACCTTTCCTCTGGAGTTGCTGGTTTCACTGCAGCCTTCTGGGTAGGGCCAAGGGCAATCAAAGATAGGGAGAGGTTCCCTCCAAACAACATACTTCTAATGCTAGCAGGGGCAGGAATTCTTTGGATGGGGTGGACGGGATTCAACGGTGGAGATCCCTACACAGCGAGTATAGATGCATCTCTTGCGGTGCTTAACACCCACGTGTGCACCGCCATGAGCTTGCTGACGTGGCTTTTCCTCGACATCCTATTCTTTGGGAAGCCTTCCGTGATCGGTGCCACTCAGGGCATGATCACCGGCTTGGTTTGCATCACCCCAGCTGCTGGAGTGGTGCAAGGTTGGGCTGCAATATTAATGGGAATAATGTCGGGGAGCATCCCGTGGTACACAATGATGGTGCTGCACAAAGAAATAAGGCTGCTCAAAATGGTGGACGATACGATGGCAGTATTCCACACGCATGCAGTGGCTGGCTGCTTAGGTGGCATTCTCACGGGGTTCTTCGCGGAGCCCAAGCTGTGTCGCCTGTTCTACATGGTACAAGATTGGGAGCACTATACAGGTCTTGCTTATGGGTTTCGGAGTGGGCGCAGAATGGCAGGCTTGAAGCAAATGGGGGTTCAGTTGGTTGGGATTGGGTTTGTAATAGTGCTAAATGTTACCACAACTAGCCTTGTGTGTTTGTTGGTTCGTATGATGGTTCCTCTGAGGCTGTCTGAGGATGACCTGCAATTAGGGGACGATGCCGTCCATGGGGAGGTGGCTTATGCGTTGTGGGGTGACGGAGAGAGGCTTGAGAATGCAAATCCAACCTCAGCTTTGGAAATGAGGGAATGGCCAACTGTGGAACCAGTCACTTCGGTTGAGTCCCAATTGGAATGA 1425 0.5186 MELTGQPTEASPEWMNKGDNAWQLTAATLVGLQSMPGLVILYGSIVKKKWAINSAFMALYAFAAVLFCWIGWAYSMSFGERMFPFLGRPNIALDQKFLLRQTFSGNFPNATMIYFQFVFAAITLILIAGALLGRMNFYAWMLFVPLWVTLSYTICAFSIWCPDGWLFRMGLIDYSGGFVIHLSSGVAGFTAAFWVGPRAIKDRERFPPNNILLMLAGAGILWMGWTGFNGGDPYTASIDASLAVLNTHVCTAMSLLTWLFLDILFFGKPSVIGATQGMITGLVCITPAAGVVQGWAAILMGIMSGSIPWYTMMVLHKEIRLLKMVDDTMAVFHTHAVAGCLGGILTGFFAEPKLCRLFYMVQDWEHYTGLAYGFRSGRRMAGLKQMGVQLVGIGFVIVLNVTTTSLVCLLVRMMVPLRLSEDDLQLGDDAVHGEVAYALWGDGERLENANPTSALEMREWPTVEPVTSVESQLE 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0732 474 PANTHER AMMONIUM TRANSPORTER MEP2 6 448 IPR001905 GO:0008519|GO:0016020|GO:0072488
Dere02g0732 474 FunFam Ammonium transporter 4 440 - -
Dere02g0732 474 Gene3D Ammonium transporter AmtB like domains 2 440 IPR029020 -
Dere02g0732 474 PRINTS Rhesus blood group protein signature 116 132 IPR002229 GO:0005886
Dere02g0732 474 PRINTS Rhesus blood group protein signature 212 230 IPR002229 GO:0005886
Dere02g0732 474 PRINTS Rhesus blood group protein signature 243 265 IPR002229 GO:0005886
Dere02g0732 474 NCBIfam ammonium transporter 19 437 IPR001905 GO:0008519|GO:0016020|GO:0072488
Dere02g0732 474 ProSitePatterns Ammonium transporters signature. 173 198 IPR018047 GO:0008519|GO:0016020|GO:0072488
Dere02g0732 474 Pfam Ammonium Transporter Family 21 437 IPR024041 GO:0008519|GO:0016020|GO:0072488
Dere02g0732 474 SUPERFAMILY Ammonium transporter 14 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0732 Dere-ChrDere02 6877050 6878658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0732 110 465 Inorganic Solute Cotransporters AT2G38290 58.146 2.20e-139 403