Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0693 ATGAGGGAGGGGCTTAGATCTCGGAAGCGGTTGGAGAAGCTGGAGGGATATGTTTCTGGAAGGGAAGTAGTTCAAGAGAAAGGACGTATCACCGAGCAAGAGGTTCCTCATTTTAGTGGTGAGGATTCTCCGCATGAGGGAGAGTCATTAGACTTGGCAGGTGTGGATAAGGAAGAGGGGAAAGTAGTAAAAGAAGAGTGTGAACTGGAGTGGGATATGGGCACGGGTATAAAAGTTGGGTTAGTTGAGAATGAGAACAATAGAAGGGTTTTAAGTTGTGGGGATGGCATTGAGAGGAAGGTGAAGAAGGAAGAGGACTCAAGTGATAAAGTGCAAATTAGTGGTCGAGTATTACGCTCACATTTGAAGAGGGCAGATGTTAAGAAATGTAGTAATGAAGAGAACAAAGCTGTGCTGGTCAGGAAAAGTCAAGGGTATGGTGCGTTTGAGAAAATACAGGTTGAGGCAGAAAAGATAGGGGCTGATGACTATGTTAGTAATGGTTATGAGAAGAAGATCAAAGAGAACATGGAAAACATTGTCAAACCAGAGTTTAAACGGAAGCGGGGGAGGCCCCCCAAAACGGAGATGAAAATGCAGAACGGTGAGTTGCAATGGAAGCAGGGAAGGCTGCCCAAGGCTGAGCAAAATTATAAGCCCATGAAAGTGGCACATAGTGAAAATAGGAAGGTAGGGTTTCAAAACGGTAAAAAAGGTTTGACTATGAGAGATGGTGCTAATACAAGGTCAACTAAAATATGCTTAAAGAGGAGATTTTGTGGGAAGGAGTTAAAAAAGGTTTCTCCTGTCAAAACCAAGAATAACGAGGTAGCATCACCATTGAGATCAAATTCTTTATATGCGCCAGTTGCTGAGAAAATTGGAAAGAGTATAGCAAAGCAGTTAGTGAGGGACCAAATAATGGAACTGCTCACTGCTGCAGGCTGGACCGTTGACTATAGGCCTAGGAATGGCAGAAGGTACAATGATGCGGTGTATGTTAGTCTGGATGGAAAGACCCACTGGTCAATCACCTTGGCCTACAATAGGCTTAAGAAGCTTTATGAGGATGGTGATGGTGAAGGTAAGGTGTATGGGCCAGGCTTTAAATTTACACCTATACCAGAAGAGGAATTCAATACATTAACTAAGGTAATGAGCAAGGAAAGAGAAGGCAAATGTAAATTGAAACAGAAAAGGAGAAAGGGTAAAAAAGTGAATAAAGAAAAACAAGCAGGCATGGGCAAGTCAATGAAGGGAAAAATGAAGAGGAAATGGTCACTTATTGAGGATGATAATTCTGATGTTATATCGCGTAACAGGATGTCGGTTCTGGTCAAGGATCATAAGCGACAGAAAACGCAAAACAAGAAGCGATGTGCTTTGTTGGTTCGTAATGCTGAGGAAGAAATAGATTCAGAAGTTGATGGATATGTACCTTACAATGGAAAACGAACTCTGCTTGCCTGGATGATTGATTTGGGAACAGTTTTGCAAAATGGGAAGGTTCATTATATGGGACACAGAAAGAATGGTGTGGCATTGGAGGGTAGGATAACAGGAGATGGTATTCACTGTGGCTGCTACTCATGGAATAAGCAAGATGAATCTGAACGTAAAGGTTTTCATTTCATTGATGTTGCTGGTGAAGACCCCAATGATGACACATGCGGTGTCTGTGGAGATGGTGGAGACCTCGTCTGTTGTGATGGTTGCCCGTCAACATTCCATCAAAGCTGCTTGGGATATGATCAGCTTCTTTTGGCAAGTTCATTGGGCATAACTTATATGCCCAATGCTCCTACGAATTATCTAATTGCTTGTGCTGTTAAGAAAGTTGTTGTTGTGGAAAACTTAAGTTTCCATTTGGTGACTGGCACTGCATTTATTGCTGTTGCAAATTTTGTGGTCTATCACAGATCCTGTATTGAGGTAGATGGTGCTCAGATTGATGATTCCAGCAATGTGTTTTGCGGAAACAGATGTCTAGAGTTATATGAAAGACTCAAAATGCTTCTTGGGGTTAAGCATGAAATTGAAGATGGATTTTCTTGGACTTTTATTCATCGGTCAGATGTTCGCTCCGATGCTTCTCAGATAAAATCTCAGATGGTTGAATGTAATTCCAAGCTAGCAGTTGCATTATTGATAATGGATGAGTGCTTCATGCCTTATATTGATCATAGAAGTGGGATTAATCTGATCCACAGTATTCTTTATAATTGTGGGTCAAACTTCAACCGCCTGAACTATAGTGGATTTATTACTGCCATTCTAGAGAGAGGAGATGAAATTATTTGTGCTGCATCTATTAGGATCCATGGGAATCAACTAGCAGAGATGCCATTTATTGGGACCCGCTCTATGTATAGACGACAAGGAATGTGCCGCCGGCTTCTAAGTGCCATTGAATGTGCACTCAGCTCTCTAAATGTTGGGTTATTGATAATACCGGCTATAGCAGAACTCACAGAAACTTGGACTTCTGTTTTTGCATTTGAGCCACTTGACCTGACAAGCAATCAAATAATAAAGAATATGAATCTGTTGGTTTTTCCTCATGTAGATATGTTACAGAAAAAGATACCAAAGCCCAATTCTACTGATGGAAATCTGGTTACTGCAGAAGTTTCCAATCCTCAACTTCAGAAGAATCAGAAAGTGCACGAGGTTGCCTCATCTGGATCTGATATGACCATTTCTGCTGAGGTTTCTACTTCAGATGCAAGCCAGATAATTGATAAATCCATATCAATTGAATCTGGTTCTCAGCTTCTTGATGGCTTATTCAATAACACAGCCGTGTTTGATAGTGATACTATACATAACGATAAATGTTCAGAAGAAGTAAAATGTCAAGTTGTCTGTCAGGAAATGTGTCATAATTTGACCGTGGAAGACAAAGGTACTGAAGAAGTTCCTGATGATGTAAGCAATGCTTGTTACCAAGCTGAACACATAAATATGTGTCAGAATGTTAATTCTGGTTGCATCATCCTGGCTCACGATGGGAGAGCAGTAAATTTTGATAACCCATTGAACCATTGCCAAGCATCTGAGGGAAGGCAATGTCTCACGGTATCAGATGAGATAGTTACAAATAGCACTAGTGCTGAGGTTTTTGAACACCACTCGTCAGAATGTATTCCTCTAGGATCACAGATTGTGTCGAGTACTAGGGAATCAAAAGATTCTGATGAAAGTACCTACCACAATTTAAAGAATATAACCCCGTTTAATGATGATGCAGGAACTTTGCATCACGAGTCTCAGAAATTCCAGGTTACAGAATCTCTTTTTTCTTCACATAATAATTCCAACAGTTGTGATCTGCTAAGCAACCATGACTCGGTTCAGCCCCACTCTATAGGATCAAAAGAATTGCTTTTTGAATCTATCAGTGGCTGTGGTTCTCAGTGTAGGCCCAATGGAATTTGTGTGTCTGGTGAACGAACTCTTCCACCTGGTGACTTGATGCACCATAGAGCACAGAGCTCTACTGAAGATTTGCCTGTTAATTGCATTAAACCGTCCAGTGTGGCTAGTGAGCTAACTGCTGATGAAGCAGAAGTTTGTGCTGCCAAGACATTCGATCACCAGACTCGCATAAATTCTGGAGATTGCCAATCCGTACAAATGGCTTCAAGTTCTTGTGAGGAGATTGCGAATGGTGTGCATGTGAACAGTAAAACATCTAGTGTAGCTGAGTTCAATTTTCTTCCAGCTGATAGGAACTTAGTTCCCAATAATAACCCTTGGATGGACCACTCTTCAGAGCTACCAGAGCCTGGTTTACAGGTTGATAAAGCTGCGCACTGTGATGGTCCGTCCTTGTGTGGCCCAAATACTGCCGGCGTGGCTCTTCACTGTGCATCTGCTGGTGGTACTTCGTGTGGTGGTACTGAGGTGATAGTTCTGTCAAACAAAGCCAGTTGA 3936 0.4167 MREGLRSRKRLEKLEGYVSGREVVQEKGRITEQEVPHFSGEDSPHEGESLDLAGVDKEEGKVVKEECELEWDMGTGIKVGLVENENNRRVLSCGDGIERKVKKEEDSSDKVQISGRVLRSHLKRADVKKCSNEENKAVLVRKSQGYGAFEKIQVEAEKIGADDYVSNGYEKKIKENMENIVKPEFKRKRGRPPKTEMKMQNGELQWKQGRLPKAEQNYKPMKVAHSENRKVGFQNGKKGLTMRDGANTRSTKICLKRRFCGKELKKVSPVKTKNNEVASPLRSNSLYAPVAEKIGKSIAKQLVRDQIMELLTAAGWTVDYRPRNGRRYNDAVYVSLDGKTHWSITLAYNRLKKLYEDGDGEGKVYGPGFKFTPIPEEEFNTLTKVMSKEREGKCKLKQKRRKGKKVNKEKQAGMGKSMKGKMKRKWSLIEDDNSDVISRNRMSVLVKDHKRQKTQNKKRCALLVRNAEEEIDSEVDGYVPYNGKRTLLAWMIDLGTVLQNGKVHYMGHRKNGVALEGRITGDGIHCGCYSWNKQDESERKGFHFIDVAGEDPNDDTCGVCGDGGDLVCCDGCPSTFHQSCLGYDQLLLASSLGITYMPNAPTNYLIACAVKKVVVVENLSFHLVTGTAFIAVANFVVYHRSCIEVDGAQIDDSSNVFCGNRCLELYERLKMLLGVKHEIEDGFSWTFIHRSDVRSDASQIKSQMVECNSKLAVALLIMDECFMPYIDHRSGINLIHSILYNCGSNFNRLNYSGFITAILERGDEIICAASIRIHGNQLAEMPFIGTRSMYRRQGMCRRLLSAIECALSSLNVGLLIIPAIAELTETWTSVFAFEPLDLTSNQIIKNMNLLVFPHVDMLQKKIPKPNSTDGNLVTAEVSNPQLQKNQKVHEVASSGSDMTISAEVSTSDASQIIDKSISIESGSQLLDGLFNNTAVFDSDTIHNDKCSEEVKCQVVCQEMCHNLTVEDKGTEEVPDDVSNACYQAEHINMCQNVNSGCIILAHDGRAVNFDNPLNHCQASEGRQCLTVSDEIVTNSTSAEVFEHHSSECIPLGSQIVSSTRESKDSDESTYHNLKNITPFNDDAGTLHHESQKFQVTESLFSSHNNSNSCDLLSNHDSVQPHSIGSKELLFESISGCGSQCRPNGICVSGERTLPPGDLMHHRAQSSTEDLPVNCIKPSSVASELTADEAEVCAAKTFDHQTRINSGDCQSVQMASSSCEEIANGVHVNSKTSSVAEFNFLPADRNLVPNNNPWMDHSSELPEPGLQVDKAAHCDGPSLCGPNTAGVALHCASAGGTSCGGTEVIVLSNKAS 1311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0693 1311 SUPERFAMILY FYVE/PHD zinc finger 549 585 IPR011011 -
Dere02g0693 1311 MobiDBLite consensus disorder prediction 390 417 - -
Dere02g0693 1311 PANTHER PHD FINGER PROTEIN 12 638 1000 IPR042163 GO:0003714|GO:0045892
Dere02g0693 1311 MobiDBLite consensus disorder prediction 25 55 - -
Dere02g0693 1311 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 546 612 IPR013083 -
Dere02g0693 1311 SMART PHD_3 556 609 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0693 Dere-ChrDere02 6541700 6550366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0693 184 869 PHD Transcription Factor Family AT5G36670 36.788 1.20e-145 471
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3246 01 47228837 47237687 Dere02g0693 02 6541700 6550366 CCT
Dere02g0693 02 6541700 6550366 Dere02g0693 02 6541700 6550366 ECH