Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0666 ATGACGCAACCACTAATTCACAGTCCTTTAAGGGGTCCAATATTGAATCTGACCAATCTTCAACGGCCGAAAGAGAAGGTAGTGGTGATCATGGGAGCCGCCGGCACCGGGACGTCCAGACTCTCCATCGACCTTGCCACCAGTTTTCCTGCAGAAATCATCAACTCCGACAAAATGCAAGTCTACGAAGGCCTTGACATAGTCACCAACAAAATCACCAAGGAAGAGCAACGTGGGGTACCTCACCATTTGCTGGGAACACAGAGCCCCAATTCAGAGTTTACAGCCACCAACTTCTGTAACGCGGCTTTACTTTCCATTGAGTCAATTACCAATCGCGGCCTGCTTCCGATCATCGTCGGAGGGTCCAACTCGTATATTGAGGCACTAATCGACGACGATGAGTATAAATTCCGATCGAGGTATGATTTCTGTTGTCTCTGGGTACACGTGTCAATGCCTGTTCTTCATCGATATGTGACGGAGCGGGTTGATCAAATGTTAGAGCGTGGAATGGTAGATGAACTGAGACCCTTTTTCAATCCCAACGGAGATTACTCGCGAGGGATAAGAAAGGCTATTGGGGTTCCTGAATTCGATCAATATTTTCGAAACGAATTGTTTGCCGACGAAGAAGTGAGGCAGAGGTTACTGGAAGAAGCGGTAAGTGAAATGAAGGAGAACACACGCAAATTGGCAGATAAACAATTGGAGAAGATTCATAGGCTGCGCAATGTCAAGGGATGGAAGATTCACCGCCTAGATGCGACACCTGTGTTTCAAAGGCATGGAGAAGAAGCGGACGAGGCATGGAAGAAGGTGGTGTAA 828 0.4758 MTQPLIHSPLRGPILNLTNLQRPKEKVVVIMGAAGTGTSRLSIDLATSFPAEIINSDKMQVYEGLDIVTNKITKEEQRGVPHHLLGTQSPNSEFTATNFCNAALLSIESITNRGLLPIIVGGSNSYIEALIDDDEYKFRSRYDFCCLWVHVSMPVLHRYVTERVDQMLERGMVDELRPFFNPNGDYSRGIRKAIGVPEFDQYFRNELFADEEVRQRLLEEAVSEMKENTRKLADKQLEKIHRLRNVKGWKIHRLDATPVFQRHGEEADEAWKKVV 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0666 275 Gene3D - 24 275 IPR027417 -
Dere02g0666 275 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 136 IPR027417 -
Dere02g0666 275 Coils Coil 218 238 - -
Dere02g0666 275 FunFam Adenylate isopentenyltransferase 5, chloroplastic 153 251 - -
Dere02g0666 275 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 153 251 - -
Dere02g0666 275 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 24 274 IPR039657 -
Dere02g0666 275 Pfam IPP transferase 137 238 - -
Dere02g0666 275 Pfam IPP transferase 60 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0666 Dere-ChrDere02 6262855 6263682 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0666 140 267 C2H2 Transcription Factor Family AT2G27760 32.903 6.49e-21 90.1