Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0665 ATGACACAACCACTAATTAACAGTCCATCAAGTGGCCGAAAATTGAATCTGACCCATCTTCAACAGCAGAAAGAGAAGGTAGTGGTGATCATGGGAGCCACCGGCACCGGGAAGTCCAGGCTCTCCATCGACCTCGCCACCCTTTTTCCTGCAGGAATCATCAACTCCGATAAAATGAAATTTTACGAAGGCCTTGACATAGTCAAGAACAAAATCATTGAGGAGGAGCAACGTGGGGTGCCTCACCATTTGCTAGGAACAATGAGCCTCAGTTCAGAGTTTAAAGCCCCCACTTCTGTGACGCGGCTTCACTTGCCATTGAGTCAATTACGAAGCGTGGAATGGGAGCGTGGAATGGTAAATGAACTGAGGCCCTTTTTCAATCCCAACGGAGATTACTCACGAGGGATAAGAAAGGCCATTGGGGTTCCTGAATTCGATCAATATTTTCGAAACGAATCGTTTGCCGATGAAGAAGTGATGCAGAGATTACTGGAAGAAGCGGTAAGTAAAATGAAGGAGAACACATGCAAATTGGCACATAAACAATTGGAGAAGATTCATAGGCTGCGTAATGTCAAGAGATGGAAGATTCACCACCTAGATGCGACGCCTGTGTTTCGAAAGCATGGGGAAGAAACAGATGAGGCATGGAAGAAGGTGGTGTCAGAGCCAAGTGCTATGATCGTCGCTAGGTTTCTTCACCATTTCACCAATACCAGTGTTGGTGCCGAGCTTGGACAAGCATCAGCCCTCCAAAGCGCCATCGCTGCGGCGCTGTTCTGA 786 0.4746 MTQPLINSPSSGRKLNLTHLQQQKEKVVVIMGATGTGKSRLSIDLATLFPAGIINSDKMKFYEGLDIVKNKIIEEEQRGVPHHLLGTMSLSSEFKAPTSVTRLHLPLSQLRSVEWERGMVNELRPFFNPNGDYSRGIRKAIGVPEFDQYFRNESFADEEVMQRLLEEAVSKMKENTCKLAHKQLEKIHRLRNVKRWKIHHLDATPVFRKHGEETDEAWKKVVSEPSAMIVARFLHHFTNTSVGAELGQASALQSAIAAALF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0665 261 Gene3D - 24 112 IPR027417 -
Dere02g0665 261 Gene3D - 113 256 IPR027417 -
Dere02g0665 261 Pfam IPP transferase 116 185 - -
Dere02g0665 261 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 24 97 IPR039657 -
Dere02g0665 261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 90 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0665 Dere-ChrDere02 6254352 6255308 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0665 30 96 C2H2 Transcription Factor Family AT2G27760 59.701 5.29e-22 92.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3301 01 47756088 47757110 Dere02g0665 02 6254352 6255308 CCT
Dere02g0665 02 6254352 6255308 Dere02g0665 02 6254352 6255308 ECH