LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere02g0664	ATGGGTTCTCGAGGAAGGCCATTATTTGATCTCAATGAACCACCTGTAGAAGACATTGATGAGAGTGATGGTATTGTTTACTTTCAGCCCCAAAAGTCACTTCCATCAACTGCAAATCCCTATGCTTCTGACATGCCTAAATCGACATGTACCCCTAAAACAAATGTTGAATTGAAGGGAGTAGAAGATAATAATACAAAGGCTTGCTCATCATCTAAGCCTAGTAAAGATAAGGATGTGAGAAAGTCATCAGTATTGAGTTCAACAAATGCTCAATCTATGGAGAGAGAAGAAGGGGAATGGTCTGATGTTAAGGGCTCTACTGATGTAAATGGCTCAAATGACTTGCAACAACAAAGCAAAGCTTCAGACGAGCAAGATATATGTGGAATGGTGGATGGATGCATTGCAATGGCTTCTGATATTAAGCCAAGTAGTGTTAAAGTTTCTGATAGTATAACAGATGAAAAGAGTAGTCAAGCTTCTATAGGTCTAGAATTAGATCCTAGTGAACAAAAAAGCAATACGATTCAAAACTCAGAAACTGGTGTAAAAAGTGAAGCTTCTATGGATGTGCAGCAGGAACCCAATTTAATTCCTAAACAAAAGGAAGTGAAAGGCATTGAAGCAAGCCATGCTTTTAGATGTGCAAACAATCTTGGAAAGAGGAAGATAGACCAACATAAAGAAGAAATGTTGGGAAAGAAATTTGAGCGTGTTGGAATAGCTAAGGATCAGAAACAGGTGGACACATCTTCTAGTGAAGTTGGTGCCCATGCTAAAGAGCACTTTCTCCATCTTATTTGTAGGGCATGCCCTTCAGAATTTATTATTCCACTGGCTAAATACAGAAAAGCTGTATATGGTACCCAACTCTCAGTTGGCATGAGATTTGGTATGATGTTTGAGACAGAGGAATTGGAAAATAAGTGGGGGACTTTGAAAAGAAGGTTGTTTATACAAGTTCCTGAAAATGCAAATGTAGAGCTTTCAAATTCTATATCAAATCTATACTTGGAACACCTGATGAAAGTTCTTTTTAAACCTCAACTTGTTAACAATCCTGGAGCCTTTCTATTAGCCATGCAGCAAAAATTTTCTGCCAAGAGTGATCATTTAGAAGAGTTGAAGACCACACTAACAACAGAAGACCAAAATGCTTGTCTTCCATGTTCAGGGAGCATATTGCCTAAAAGTTTAGATCATTCTCAATCCTTCCCGGACCAATCTAATGTTCAGGGGGCAAACCCACGATAG	1257	0.3858	MGSRGRPLFDLNEPPVEDIDESDGIVYFQPQKSLPSTANPYASDMPKSTCTPKTNVELKGVEDNNTKACSSSKPSKDKDVRKSSVLSSTNAQSMEREEGEWSDVKGSTDVNGSNDLQQQSKASDEQDICGMVDGCIAMASDIKPSSVKVSDSITDEKSSQASIGLELDPSEQKSNTIQNSETGVKSEASMDVQQEPNLIPKQKEVKGIEASHAFRCANNLGKRKIDQHKEEMLGKKFERVGIAKDQKQVDTSSSEVGAHAKEHFLHLICRACPSEFIIPLAKYRKAVYGTQLSVGMRFGMMFETEELENKWGTLKRRLFIQVPENANVELSNSISNLYLEHLMKVLFKPQLVNNPGAFLLAMQQKFSAKSDHLEELKTTLTTEDQNACLPCSGSILPKSLDHSQSFPDQSNVQGANPR	418

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere02g0664	418	MobiDBLite	consensus disorder prediction	29	71	-	-
	Dere02g0664	418	PANTHER	AUXIN RESPONSE FACTOR 4-RELATED	270	308	IPR044835	GO:0003677\|GO:0006355\|GO:0009725
	Dere02g0664	418	MobiDBLite	consensus disorder prediction	1	125	-	-
	Dere02g0664	418	MobiDBLite	consensus disorder prediction	145	196	-	-
	Dere02g0664	418	Pfam	Auxin response factor	270	310	IPR010525	GO:0003677\|GO:0005634\|GO:0006355\|GO:0009725
	Dere02g0664	418	MobiDBLite	consensus disorder prediction	144	199	-	-
	Dere02g0664	418	MobiDBLite	consensus disorder prediction	106	125	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere02g0664	Dere-ChrDere02	6207811	6209951	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere02g0664	270	306	B3 DNA Binding Superfamily	AT1G19850	83.784	2.98e-15	76.3