Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0644 ATGATTCCTTGGGGTGGAGTCAGTTGCTGTTTGAGTGCGGCTGCACTTTACCTTCTCGGGAGAAGTAGCGGCAGGGATGCCGAAATTCTTAAATCCGTTACCCGGGTCAATCAGTTAAAGGAATTAGCGCAACTGTTAGATGCTGAAGTATTACCTTTGGTTGTTGCAATTTCTGGAAGAGTTGGCTCTGAAACTCCAGTTAACTGCGAATTCAGTGGTTTAAGGGGTGTAATAGTTGAAGAAACGGCAGAGCAACATTTTCTTAAACACAATGATGCTGGTTCATGGATACAAGATTCTGCTTTGATGCTATCCATGAGTAAAGAGGTTCCTTGGTATCTGGATGATGGAACTGGTCGTGTTCACGTGGTTGGAGCTCGGGGTGCCACAGGTTTTGTATTACCTGTTAAAAGTGAAGCATTTGAAGAGTCAGGTCGTTCACTTGTCCGTGGAACATTAGATTATCTCCAAGGTCTCAAGATGCTTGGAGTCAGGAGAATTGAACGGGTACTTCCAATTGGCACGTCTTTGACAGTTGTTGGTGAGTCTGCTAGAGATGACTTAGGAACTGTCCGAATTCAGCGACCCCACAAAGGGCCATTTTATGTCTCTCCCAAAACGATTGATCAGCTCATTGCAAATCTTGGGAAATGGGCAAGGTGGTATAAGTATGCATCTGTGGGCTTGACACTTTTTGGTGCTTATCTAATAGCTAAGCATGCTATTCAGAACATTTTGGAAAGACGGCGTCGTTGTGAACTGCAAAAAAGGGTTCTTGCTGCTGCTGCAAAGAGGTCAGGACAAGATAATGAAGGTGAAAAGGTTGACAGCTTATCAGATGGTGCAAAAAGAGATCGCATAATGCCAGATTTGTGTGTAATATGCCTGGAGCATGATTACAATGCTGTTTTTGTTCCGTGTGGGCATATGTGCTGCTGTACAGTTTGCTCTTCCCAATTAACCAGCTGTCCTCTTTGCCGGCGACGGATAGAGCAGGTAGTGAAGACTTTTCGTCATTGA 1020 0.4451 MIPWGGVSCCLSAAALYLLGRSSGRDAEILKSVTRVNQLKELAQLLDAEVLPLVVAISGRVGSETPVNCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTGRVHVVGARGATGFVLPVKSEAFEESGRSLVRGTLDYLQGLKMLGVRRIERVLPIGTSLTVVGESARDDLGTVRIQRPHKGPFYVSPKTIDQLIANLGKWARWYKYASVGLTLFGAYLIAKHAIQNILERRRRCELQKRVLAAAAKRSGQDNEGEKVDSLSDGAKRDRIMPDLCVICLEHDYNAVFVPCGHMCCCTVCSSQLTSCPLCRRRIEQVVKTFRH 339
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0644 339 FunFam E3 ubiquitin-protein ligase SP1 280 338 - -
Dere02g0644 339 FunFam Baculoviral IAP repeat containing 7 301 337 - -
Dere02g0644 339 PANTHER - 1 306 IPR044231 GO:0004842|GO:0016567
Dere02g0644 339 Pfam E3 Ubiquitin ligase 85 233 IPR022170 GO:0004842|GO:0006996|GO:0016567
Dere02g0644 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 262 338 IPR013083 -
Dere02g0644 339 Pfam Zinc finger, C3HC4 type (RING finger) 290 333 - -
Dere02g0644 339 SUPERFAMILY RING/U-box 291 333 - -
Dere02g0644 339 ProSiteProfiles Zinc finger RING-type profile. 292 327 IPR001841 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0644 1 272 C3H Transcription Factor Family AT1G63900 76.277 6.12e-155 434
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g0644 02 6038742 6042492 Dere02g0644 02 6038742 6042492 ECH