Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0631 ATGAATATTACTACCCGACAGCAATTGGAACATTTCGTTCCTAAGTCAGCTCTTCATAATTTACAGCGGTATTGCAATCAATCGCTTGAGAATAACTCCCCTTGCGCTCTTTGTACTACCAGCTTGTCGAATTTGCCTTCTTTGTACTTGACGGGAGGATCGACTGGGAACGTCTCCGATTGTAGGGACTTTTCATCAATTTATGCCGCTGCCTTCGCCAATCAGTATGGACCCACTGACACCGGGACTGCTAAGTGCTTGTTCTCCTTGGATATTGTGTCTGCGAGTTCCGGTGGTAAGATGGGAAAGGTTGTTATTACGATTGTTTCCATTATTTCTGTATGGGGTTTGTTATTCGTGATTGGTGGGTTTTGGTTTTGTTGGAGATTGAACAAGAAGAAGACGATGAGAAAGTACAATGTTAGCAAAACTGACAAGGGGTTTGTTTCTGGGTTGAATTCCTTGAATGAGAGCACCACCTTAATTAGGTTCACATTTGATGACATTAAGAAGGCAACTAAGAACTTCAACAGGGACAACATAATTGGGAGAGGAGGATATGGGAATGTCTATAAAGGGGTGCTCCCCGATGGGAGTGAAGTTGCATTGAAAAGATTCAAGAATTGTTCAGCAGCAGGGGATGCAAGTTTCACTCATGAAGTCGAGGTTATTGCAAGCGTGAGGCATGTAAACCTAGTTGCTTTGAGAGGTTATTGCACTGCCACAACTAATCTAGAGGGTCACCAGAGGATTATCGTTTGTGATTTGATGAAGAATGGGAGTCTTCATGATCATTTGTTTGGTTCAATGGGGAAGAAACTCAGTTGGCCAACCCGTCAAAAGATTGCACTGGGGACTGCAAGAGGATTGGCTTATTTGCATTACGGGGCTCAGCCAGCCATTATCCATAGGGATATAAAAGCCAGCAATATACTTCTGGATGAGAAGTTTGAAGCAAAGGTAGCAGACTTCGGACTTGCGAAGTTCAACCCTGAGGGAATGACGCATATGAGCACTAGGGTAGCTGGAACCATGGGATATGTTGCTCCCGAGTACGCATTGTACGGGCAGTTAACAGAGAGAAGTGATGTCTTCAGTTTTGGTGTTGTGCTTCTTGAACTTTTGAGTGGGAAGAAGGCTCTTCAAATGAACCATGACGACCAACCCTCTGCAGTCACTGACTGGGCTTGGTCATTGGTTAGAACAGGTAGACCTTTGGATGTTATTGAAGATGGTATGCCAGAAACTGGTTCGCCGGAAGTTTTGGAGAAGTATGTGTTGGTGGCTGTACTTTGTTCTCACCCGCAGTTATATGCCAGGCCAACAATGGACCAGATTGTTAAGATGTTGGAGTCAGATCAATCAGTACCCTCTATACCAGAACGACCAATTCCTCTCATTTCTGGGAGAATTGATATTGAGAGATCTATCGGCAGTAGTGGGTCGGGTCAGCTTTCAAGTCCAACTGGTTATCAAGCATATCCATGTGAGACTGACCGCCTTTCTTCAAATTCCAAGGAAGAAGCTAGTTGA 1533 0.4436 MNITTRQQLEHFVPKSALHNLQRYCNQSLENNSPCALCTTSLSNLPSLYLTGGSTGNVSDCRDFSSIYAAAFANQYGPTDTGTAKCLFSLDIVSASSGGKMGKVVITIVSIISVWGLLFVIGGFWFCWRLNKKKTMRKYNVSKTDKGFVSGLNSLNESTTLIRFTFDDIKKATKNFNRDNIIGRGGYGNVYKGVLPDGSEVALKRFKNCSAAGDASFTHEVEVIASVRHVNLVALRGYCTATTNLEGHQRIIVCDLMKNGSLHDHLFGSMGKKLSWPTRQKIALGTARGLAYLHYGAQPAIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGKKALQMNHDDQPSAVTDWAWSLVRTGRPLDVIEDGMPETGSPEVLEKYVLVAVLCSHPQLYARPTMDQIVKMLESDQSVPSIPERPIPLISGRIDIERSIGSSGSGQLSSPTGYQAYPCETDRLSSNSKEEAS 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0631 510 SUPERFAMILY Protein kinase-like (PK-like) 152 451 IPR011009 -
Dere02g0631 510 Pfam SPARK 1 59 IPR043891 -
Dere02g0631 510 Gene3D Transferase(Phosphotransferase) domain 1 257 458 - -
Dere02g0631 510 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 257 458 - -
Dere02g0631 510 ProSitePatterns Protein kinases ATP-binding region signature. 182 204 IPR017441 GO:0005524
Dere02g0631 510 Pfam Protein kinase domain 177 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0631 510 MobiDBLite consensus disorder prediction 477 500 - -
Dere02g0631 510 MobiDBLite consensus disorder prediction 477 510 - -
Dere02g0631 510 CDD STKc_IRAK 182 451 - -
Dere02g0631 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Dere02g0631 510 SMART serkin_6 176 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0631 510 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 137 255 - -
Dere02g0631 510 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 26 478 - -
Dere02g0631 510 ProSiteProfiles Protein kinase domain profile. 176 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0631 510 Gene3D Phosphorylase Kinase; domain 1 138 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0631 Dere-ChrDere02 5930869 5932401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0631 1 505 Receptor kinase-like Gene Family AT2G48010 67.913 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Dere02g0631 Pkinase 3.7e-43 CL0016