Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0626 ATGGCTGGTAGCAATGAAGTCAACCTCAATGAATCCAAGAGTGTTGTGCCGCTGAATACTTGGGTTCTTATCTCCAATTTCAAGCTGGCCTACAATTTACTTAGACGAGCTGATGGAACCTTCAACCGCGAGTTGGCAGAGTTCCTTGACCGGAAGGTCCCTGCCAATACAATTCCGGTCGATGGAGTATTCTCTTTCGACCATGTTGATCGAAACACCGGCCTCTTCAATCGGGTGTATCAACCAGCTCCAAAAAATGAGTCTCAGTGGGGCATTATAGAGCTTGAAAAGCCCCTGAGCACCACCAAAATCGTCCCTGTCATTATTTTCTTCCATGGTGGAAGCTTCTCTCATTCCTCTGCTAATAGTGCTATCTATGACACTTTCTGCCGCCGCCTTGTGAACATATGTAAAGCAGTTGTGGTCTCCGTAAACTACCGCCGATCACCAGAACATAGGTATCCTAGTGCATACGATGATGGCTGGGCTGCACTTAAGTGGGTTAAATCAAGAACATGGCTTCAGAGTGGGAAGGATTCCCAGGTTTATGTATACCTGGCTGGCGATAGTTCAGGTGGCAACATCGTTCACCATGTGGCAGTGAGGGCTGCTGAAGCAGATGTTGAGGTACTGGGTAATATCCTGCTTCATCCATTGTTTGGAGGGCAGAAACGAACAGAGTCAGAGAAGAGACTGGATGGGAAGTACTTTGTGAGATTGCAAGACCGTGATTGGTATTGGAGAGCATTTCTCCCAGAAGGGGAAGACAGAGATCATCCAGCATGTAACCCATTTGGTCCCAGAGGAAAAAGCCTTGCAGGACTCAGGTTCCCTAAAAGTCTTGTGTGTGTGGCAGGTTTGGATCTTGTCCAAGATTGGCAATTGGCATATGCGGAAGGTCTCAAGAATTCTGGCCAAGAGGTTAAACTTCTTTACCTAAAGGAGGCCACAATCGGATTCTATTTCTTGCCAAATAATGATCATTTCTACTGCCTTATGGAGGAGCTAAACAACTTCGTGAATTCTAACTGAGGGAAGATGATGGATAAGGCTTCATTGATCACTTTGTTTAGGGTAAATGCATATTGCAACGTATTCATTTGTGAATATGAACTGGAGCAGATTCCGTCCTGTTATGAACTTGTCAATTGGGGCCAGGCCTCACCAACTACTCTGGCAAGAGGCATTCCTATAAAACATAGGCGTCAGAGTTTGCTGCGTTTTTCATTTCGTAATAAAAATTGTTGGGGCAAAGGCAGTGGCATCTCATTATTTGGGTCCTCACCTCATTTGAGAGGTGAAACATCAACGTGTACTCCTGTAGATAAAAGGTCCAAAGATTGCTGTCTTGTTTTGAAGAAAACTTACTCTGATGCTGAGTTTCCAAGGCTGAATTTTCCCACTAGAGGAGGAAAAATTACAGAAGGTTTCATCATCAGCATTCAGCACAGTGAAACACGTAAGGAATTGGAACTGTGCTGTCGAAGAATCTTCGATCAAGACAAAAGGGAAAAAGGTAGATTCCTTGGCTATTCAGCTGACAGAGGAATTTTAGCTGTTCAGTACATGTTTGAGGTTTCAGCTGACTTATACTTCATTGAAGATGTCTTTCGACTAGAGATAGAATCCAACCTATGTGATGATGCAAATGCCATCTATGAACATTGTAGCAGTCGACAGACTAACAAATCATTGAAGAATGTAGACAATGAAATTGCTCAGATTACAAAGTTGAAGTCAATACCTCATCATCTACTAAGCCAAGTTGGACCTGGAAGGCCTCAGTTGCCTGTTTCCCCTGTGAAAATGTTAGCAGGTCGGGAATCTAATTATTCAGGATTGGGAAGGTTTTCATCAGCCGATTGTTGTCATATCTTGAGCAGATATTTGCCAGTCAATGGTCCCTGGCTCATTGATCAAATGGCAACTCGAGCTTATGTGTCTCAGTTTTCAGCTGATGGCTCCTTATTTGTTGCTGGATTTCAGGGAAGCCACATAAGAATCTACAATGTGGACAAAGGTTGGAAAGTTCAGAAGAACATCCTAGCCAAAAGTTTAAGATGGACAATCACAGATACATCCCTTTCCCCTGATCAACGCTATCTTGTTTATGCCAGCATGTCACCTATTGTACACATTGTAAATGTTGGATCTGCTGAAACAGAGTCCTTGGCAAATGTTACGGAGATCCATGACGGTTTGGATTTTTCTTCAAATGATGATGGAGGATACTCTTTTGGAATCTTCTCTGTGAAATTTTCCACAGATGGGAGAGAGTTAGTTGCCGGAAGTAGTGGTGATTCTATATATGTATATGATCTTGAGGCAAATAAGCTGTCTCTCCGAATTTTAGCACACACGTCTGATGTGAACACGGTATGTTTTGCTGATGAAACGAGCCACCTTATTTATTCTGGAAGTGATGATACTTTCTGCAAGGTATGGGATCGACGTTGCTTAATTGCTAAAGGCAAGCCAGCAGGAGTTCTAATGGGACACCTTGAGGGAATTACGTATATTGATAGCCGTGGTGATGGACGCTATTTCATTTCAAATGGTAAAGATCAGACCATCAAACTTTGGGACATACGCAAAATGTCATCAAATGTTACCTGCAATCCTGGGTATAGGAGCTATGAATGGGATTACAGATGGATGGATTACCCACCTCAGGCAAAAGATTTAAAGCACCCTTATGATCAGTCAGTGGCTACATATAGAGGTCATTCAGTCTTGGGCACTCTTATCCGCTGCCATTTCTCCCCCGTATATAGTACTGGCCAAAAGTACATCTACACCGGATCACACAACGCATGTGTTTATATTTATGATTTGGTAAGTGGAGCACAAGTTGCAGCGCTGAAGCACCACAAATCTCCTGTAAGAGATTGTAGTTGGCATCCTTTCCAAACTATGCTTGTTAGCTCTTCATGGGACGGGGATGTTGTGAAATGGGGGTTTCCTGGGAGTGGTGAAGTACCAGCCCCTTCCACTAAGATGAGAGTTTGGAGAAGACCCTTTTTTGAAGATTGA 3033 0.4332 MAGSNEVNLNESKSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANTIPVDGVFSFDHVDRNTGLFNRVYQPAPKNESQWGIIELEKPLSTTKIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVNICKAVVVSVNYRRSPEHRYPSAYDDGWAALKWVKSRTWLQSGKDSQVYVYLAGDSSGGNIVHHVAVRAAEADVEVLGNILLHPLFGGQKRTESEKRLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPRGKSLAGLRFPKSLVCVAGLDLVQDWQLAYAEGLKNSGQEVKLLYLKEATIGFYFLPNNDHFYCLMEELNNFVNSNXGKMMDKASLITLFRVNAYCNVFICEYELEQIPSCYELVNWGQASPTTLARGIPIKHRRQSLLRFSFRNKNCWGKGSGISLFGSSPHLRGETSTCTPVDKRSKDCCLVLKKTYSDAEFPRLNFPTRGGKITEGFIISIQHSETRKELELCCRRIFDQDKREKGRFLGYSADRGILAVQYMFEVSADLYFIEDVFRLEIESNLCDDANAIYEHCSSRQTNKSLKNVDNEIAQITKLKSIPHHLLSQVGPGRPQLPVSPVKMLAGRESNYSGLGRFSSADCCHILSRYLPVNGPWLIDQMATRAYVSQFSADGSLFVAGFQGSHIRIYNVDKGWKVQKNILAKSLRWTITDTSLSPDQRYLVYASMSPIVHIVNVGSAETESLANVTEIHDGLDFSSNDDGGYSFGIFSVKFSTDGRELVAGSSGDSIYVYDLEANKLSLRILAHTSDVNTVCFADETSHLIYSGSDDTFCKVWDRRCLIAKGKPAGVLMGHLEGITYIDSRGDGRYFISNGKDQTIKLWDIRKMSSNVTCNPGYRSYEWDYRWMDYPPQAKDLKHPYDQSVATYRGHSVLGTLIRCHFSPVYSTGQKYIYTGSHNACVYIYDLVSGAQVAALKHHKSPVRDCSWHPFQTMLVSSSWDGDVVKWGFPGSGEVPAPSTKMRVWRRPFFED 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0626 1010 ProSiteProfiles Trp-Asp (WD) repeats profile. 783 816 IPR001680 GO:0005515
Dere02g0626 1010 SUPERFAMILY WD40 repeat-like 647 985 IPR036322 GO:0005515
Dere02g0626 1010 Gene3D - 883 1002 IPR015943 GO:0005515
Dere02g0626 1010 Pfam WD domain, G-beta repeat 825 862 IPR001680 GO:0005515
Dere02g0626 1010 Pfam WD domain, G-beta repeat 951 985 IPR001680 GO:0005515
Dere02g0626 1010 Pfam WD domain, G-beta repeat 782 816 IPR001680 GO:0005515
Dere02g0626 1010 FunFam LEC14B protein-like isoform X1 632 739 - -
Dere02g0626 1010 FunFam LEC14B homolog isoform X2 884 1000 - -
Dere02g0626 1010 SMART WD40_4 823 862 IPR001680 GO:0005515
Dere02g0626 1010 SMART WD40_4 721 773 IPR001680 GO:0005515
Dere02g0626 1010 SMART WD40_4 947 986 IPR001680 GO:0005515
Dere02g0626 1010 SMART WD40_4 679 715 IPR001680 GO:0005515
Dere02g0626 1010 SMART WD40_4 899 944 IPR001680 GO:0005515
Dere02g0626 1010 SMART WD40_4 634 670 IPR001680 GO:0005515
Dere02g0626 1010 SMART WD40_4 777 816 IPR001680 GO:0005515
Dere02g0626 1010 ProSiteProfiles Trp-Asp (WD) repeats profile. 954 985 IPR001680 GO:0005515
Dere02g0626 1010 FunFam Gibberellin receptor GID1 1 342 - -
Dere02g0626 1010 SUPERFAMILY alpha/beta-Hydrolases 73 341 IPR029058 -
Dere02g0626 1010 FunFam DDB1 and CUL4-associated factor 11 740 882 - -
Dere02g0626 1010 Gene3D - 635 882 IPR015943 GO:0005515
Dere02g0626 1010 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Dere02g0626 1010 PANTHER DDB1- AND CUL4-ASSOCIATED FACTOR 11 542 999 - -
Dere02g0626 1010 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Dere02g0626 1010 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 783 816 - -
Dere02g0626 1010 ProSiteProfiles Trp-Asp (WD) repeats profile. 830 871 IPR001680 GO:0005515
Dere02g0626 1010 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Dere02g0626 1010 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Dere02g0626 1010 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 830 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0626 Dere-ChrDere02 5899651 5911917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0626 1 342 Carbohydrate Esterase AT3G63010 79.592 0.0 582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g0626 02 5899651 5911917 Dere02g0626 02 5899651 5911917 ECH