Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0624 ATGGGCACTAAGCCGTGGTTGTACCCAGCTCCGACCTATCGAAGTCTAGAGGCCTATTGGGATACCGATGAGGACGCCCCTGGTCCACGAACGGCCCACACGCTCACGGCCGTTGCCGCCACAAAGTCACACGGTCCCCGCCTTATCCTCTTTGGGGGCGCCACCGCCATTGAAGGAGGCTCTTCCTCTGCTCCCGGCATTCGATTAGCGGGAGTCACAAATTCGGTTCATTCCTACGACGTTCTTACAAGAAAATGGGCCAGAATAAGACCTGCTGGAGAGCCGCCCTCCCCTCGGGCTGCCCATGCTGCCGCTGCTGTTGGAACTATGGTTGTTTTCCAGGGCGGGATAGGTCCCGCTGGGCATTCGACGGATGATCTCTATGTGCTTGACCTGACAAATGATAAATTCAAGTGGCACAGAGTCGTTGTGCAAGGACAAGGACCCGGACCTCGCTATGGCCATGTGATGGACTTGGTTGCTCAGAGATATCTTGTTACTGTCACCGGGAATGATGGGAAAAGAGTTCTGTCTGATGCTTGGGTTTTGGATACTGCTCAAAAGCCTTATGTGTGGCAGAGGTTAAACCCGGATGGTGATAGACCTTCTGCTAGAATGTATGCAACTGCTAGTGCCCGTTCAGATGGCATGTTTTTGCTGTGTGGTGGAAGAGACTCTTCTGGAGCACCGCTAGGAGATGCCTATGGATTGCTCATGCATAGGAATGGTCAGTGGGAATGGACCCTTGCACCTGGAGTTTCCCCTTCACCAAGGTATCAACATGCTGCGGTTTTTGTCGGTGCAAGATTGCACGTTACAGGCGGTGTTCTTAGGGGAGGACGTGCAGTAGAAGGTGAAGCAGCCATTGCAGTACTGGACACTGCTGCTGGGGTTTGGCTGGACAGAAATGGCCTTGTGACCTCCTCACGCACAAGTAAAGGTCATGATTATGATCCTTCTTTGGAAGTTATGCGTCGTTGTCGCCATGCAGCAGCTGCTGTTGGTGTTCGCATATATATTTATGGTGGTCTCAGAGGAGATACGCTACTAGATGATTTCCTAGTGGCTGAAAATTCACCACATCAATCTGAAATTGACTCTCCTGTTTTAACGGCTGAGAGAGCTTCACCTATTACAAGCCCTAAAAGGAATCAGTCTAACTCAGCTTATAATGTGACAACACCAAGTTTGGATGGTGGACCAGGCATTCTCTCATCTGGTGGCATGGGCACCATGGATAAAAATTCCATGGAGAAACTGAGGGAAGCATCAGCTGCGGAGGCTGAGGCTGCAAGTGCTGTCTGGCAAGCTGTGCAGGCTGTATCGAGCAGTCAAGCTGAAGAAACATCTTTATCAGACGACAACTCTCAAGCTGCTGAAACAGCTTCAGATGGCAGTGATGCAGAGGGAGATGTTCGCCTTCATCCAAGAGCTGTTGTAGTTGCTAAAGAGGCTGTAGGCAACCTGGGTGGAATGGTGAGACAGTTATCGTTGGATCAATTTGAAAATGAGAGCAGACGGATGGTTCCCATAAATAATGATTTGCCATATCCTACAAAAAAGTTCATCAGACAGAAATCCCCTCAGGGATTGCATAAAAAGATAATCTCAACTTTGCTCAGGCCTTGTAACTGGAAAGCTCCTGCAAACAGGCGGTTTTTCTTGGATTCTTATGAAGTGGGTGAGCTGTGTTATGCTGCTGAACAGATATTTATGCATGAACCAAGTGTTCTACAGCTGAAAGCTCCTGTCAAAGTGTTTGGTGATCTTCATGGACAGTTTGGTGATTTGATGCGGCTATTTGATGAATATGGATTTCCTTCAACTGCAGGAGACATAACGTATATTGACTACCTCTTTTTGGGAGATTATGTTGATCGAGGACAGCACAGCTTGGAAACCATTACCTTGCTTCTTGCTCTTAAGATTGAGTATCCTGAGAATGTTCACTTGATACGTGGAAACCATGAAGCAGCTGACATAAATGCACTATTTGGTTTTCGCATTGAGTGCATTGAGAGAATGGGAGAAAATGATGGAATATGGGCATGGACGCGGTTCAATCAACTTTTCAACTATCTCCCACTTGCTGCTCTCATTGAAAAGAAAATTATCTGTATGCATGGCGGCATAGGAAGGTCTATACATTCAGTAGAACAGATAGAGAAGCTCGAAAGGCCCATAACGATGGATGCAGGATCTATTATTTTAATGGACCTTCTATGGTCTGATCCCACAGAGAATGATAGTGTAGAGGGTTTGAGACCAAATGCCAGAGGGCCTGGACTTGTCTCATTTGGGCCTGATCGTGTCACAGAATTCTGCAAGAAAAACAAATTACAGCTCATTATACGTGCCCATGAGTGTGTCATGGATGGCTTTGAGCGATTTGCCCAGGGACAATTAATAACTCTTTTTTCTGCAACTAACTATTGCGGGACGGCAAACAATGCTGGAGCTATACTGGTAGTTGGAAGGGGTTTGGTTGTGGTTCCAAAATTGATTCATCCCTTACCACCGCCCCTTCAGTCTCCTGAGACATCTCCTGAGCGTGTCATGGATGAGACATGGATGCAGGAGCTTAATATTCAGAGGCCACCAACTCCTACTCGGGGCCGACCGCAGCCAGACCATGATCGCAGCTCACTAGCATACATATGA 2661 0.4769 MGTKPWLYPAPTYRSLEAYWDTDEDAPGPRTAHTLTAVAATKSHGPRLILFGGATAIEGGSSSAPGIRLAGVTNSVHSYDVLTRKWARIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLYVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVTGNDGKRVLSDAWVLDTAQKPYVWQRLNPDGDRPSARMYATASARSDGMFLLCGGRDSSGAPLGDAYGLLMHRNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLRGGRAVEGEAAIAVLDTAAGVWLDRNGLVTSSRTSKGHDYDPSLEVMRRCRHAAAAVGVRIYIYGGLRGDTLLDDFLVAENSPHQSEIDSPVLTAERASPITSPKRNQSNSAYNVTTPSLDGGPGILSSGGMGTMDKNSMEKLREASAAEAEAASAVWQAVQAVSSSQAEETSLSDDNSQAAETASDGSDAEGDVRLHPRAVVVAKEAVGNLGGMVRQLSLDQFENESRRMVPINNDLPYPTKKFIRQKSPQGLHKKIISTLLRPCNWKAPANRRFFLDSYEVGELCYAAEQIFMHEPSVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSIHSVEQIEKLERPITMDAGSIILMDLLWSDPTENDSVEGLRPNARGPGLVSFGPDRVTEFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPLQSPETSPERVMDETWMQELNIQRPPTPTRGRPQPDHDRSSLAYI 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0624 886 Gene3D - 240 386 IPR015915 GO:0005515
Dere02g0624 886 FunFam Serine/threonine-protein phosphatase 520 859 - -
Dere02g0624 886 PRINTS Serine/threonine phosphatase family signature 719 746 IPR006186 GO:0016787
Dere02g0624 886 PRINTS Serine/threonine phosphatase family signature 583 610 IPR006186 GO:0016787
Dere02g0624 886 PRINTS Serine/threonine phosphatase family signature 618 645 IPR006186 GO:0016787
Dere02g0624 886 PRINTS Serine/threonine phosphatase family signature 651 675 IPR006186 GO:0016787
Dere02g0624 886 PRINTS Serine/threonine phosphatase family signature 801 817 IPR006186 GO:0016787
Dere02g0624 886 PRINTS Serine/threonine phosphatase family signature 779 799 IPR006186 GO:0016787
Dere02g0624 886 PRINTS Serine/threonine phosphatase family signature 689 715 IPR006186 GO:0016787
Dere02g0624 886 PIRSF STPPP_BSU1 1 886 IPR012391 GO:0004721|GO:0009742
Dere02g0624 886 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 8 886 - -
Dere02g0624 886 MobiDBLite consensus disorder prediction 373 400 - -
Dere02g0624 886 Gene3D - 10 236 IPR015915 GO:0005515
Dere02g0624 886 MobiDBLite consensus disorder prediction 862 886 - -
Dere02g0624 886 Pfam Calcineurin-like phosphoesterase 583 790 IPR004843 GO:0016787
Dere02g0624 886 ProSitePatterns Serine/threonine specific protein phosphatases signature. 652 657 IPR006186 GO:0016787
Dere02g0624 886 MobiDBLite consensus disorder prediction 445 471 - -
Dere02g0624 886 MobiDBLite consensus disorder prediction 361 414 - -
Dere02g0624 886 FunFam Serine/threonine-protein phosphatase 9 192 - -
Dere02g0624 886 Gene3D - 527 857 IPR029052 -
Dere02g0624 886 Pfam Kelch motif 96 133 - -
Dere02g0624 886 MobiDBLite consensus disorder prediction 445 463 - -
Dere02g0624 886 SMART pp2a_7 555 841 IPR006186 GO:0016787
Dere02g0624 886 SUPERFAMILY Metallo-dependent phosphatases 537 847 IPR029052 -
Dere02g0624 886 SUPERFAMILY Kelch motif 73 357 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0624 Dere-ChrDere02 5876202 5883240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0624 584 782 Calmodulin-binding Proteins AT5G63870 32.609 2.45e-27 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g0624 02 5876202 5883240 Dere02g0624 02 5876202 5883240 ECH