Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0594 ATGAAAGCATTCCAGAGTCCCGGGTTGGTTAATCGAACTATTTCTTGTGTATTTATTTCCAGAAAATCCAAGCTGAGTATTAGAGTTTCAAATGCACGGTTCTCGGTTTCTTTTCTGAATCGGTCATTTGCAAGACCAATCTCCTTTAAAATTGAAGCTAGTAGTTCCAATTTCACTCTCTCTTACCTCATAGATTCTTGTGGATTGGCTCCAGAAGCTGCTGCTCTAGCTTCCCAAAAGGTACAGCTTCATTCGGCAGAGAGACCGAACTCTGTCCTAACTCTGCTCAGAGAACATGGCTTCTCAAAATCCCAGATTTCAAGCGTTGTCAGGAAGCGCCCATTGCTCCTTTTAGCTAACCCCAAGGATACCCTTCTGCCGAAGCTTGAATTTTTTCACTCTATAGGGATTTCTAGGTCTGACCTCGCTAGAATTCTCGCTGCAGACCCAACCATTTTGACGAGAAGCTTGGGGAAACAGATAATACCTTCTTATAATTTCCTGAAAAGTGTGTTGCTGTCTGATGAGAAGGTCGTTGCTGCCTTGAAGCGCACGTCGTGGGTTTTTCTCGAAGACCATTCCAAGAAGCTCATACCAAATCTCTCCGTTCTGAGAGTAACGGGTGTGCCAGAATCATGCATTGCATTGTTACTCGCTCATTTCCCTGAGGCTTTAATCCAAAAAAATGATCAATTTACAAAGATCGTCGAAGAGATTAAGGAAATGGGATTCGATCCAACCAAGTCGACATTCGTGTTAGCGATTCATGTAATCGCAGGTAATAAATCGATATATAATCGCTGCTTCGAGGTATACCAGAGGTGGGGTTGGTCGGAGGATGAGATTCTAATGTCATTCCGAAAGCATCCAAATTCTATGCTTCTATCAGAGGATAAGATAACGAAGGCAATGGATTTCTTTGTGAACAAGATGGGATGGCCTTCAGGGATGATAGCGAGATGCCCAGTGGTGTTGTTTTTCAGCTTGGAGAACAGAATCAAGCCCAGGTGCTCAGTTGTTCAGGTTTTGCGATTGAAGGGTTTGATCAAGAAAACTCTGAGCTTGTCCACTGTGCTGCTACCAGATGAGAAACGTTTCTTGGACAAGTTCGTCACAAAGTACGAGCAGCAAGTGCCTGAATTGTGGAATGTCTATCAGATGAAAGTGGATTATAGGAGCGTCATTTAA 1188 0.4335 MKAFQSPGLVNRTISCVFISRKSKLSIRVSNARFSVSFLNRSFARPISFKIEASSSNFTLSYLIDSCGLAPEAAALASQKVQLHSAERPNSVLTLLREHGFSKSQISSVVRKRPLLLLANPKDTLLPKLEFFHSIGISRSDLARILAADPTILTRSLGKQIIPSYNFLKSVLLSDEKVVAALKRTSWVFLEDHSKKLIPNLSVLRVTGVPESCIALLLAHFPEALIQKNDQFTKIVEEIKEMGFDPTKSTFVLAIHVIAGNKSIYNRCFEVYQRWGWSEDEILMSFRKHPNSMLLSEDKITKAMDFFVNKMGWPSGMIARCPVVLFFSLENRIKPRCSVVQVLRLKGLIKKTLSLSTVLLPDEKRFLDKFVTKYEQQVPELWNVYQMKVDYRSVI 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0594 395 Gene3D Transcription termination factor 3, mitochondrial 156 387 IPR038538 -
Dere02g0594 395 PANTHER CGI-12 PROTEIN-RELATED 55 375 IPR003690 GO:0003690|GO:0006355
Dere02g0594 395 Pfam mTERF 93 246 IPR003690 GO:0003690|GO:0006355
Dere02g0594 395 Pfam mTERF 262 367 IPR003690 GO:0003690|GO:0006355
Dere02g0594 395 FunFam Mitochondrial transcription termination factor-like 157 378 - -
Dere02g0594 395 SMART mt_12 143 174 IPR003690 GO:0003690|GO:0006355
Dere02g0594 395 SMART mt_12 315 349 IPR003690 GO:0003690|GO:0006355
Dere02g0594 395 SMART mt_12 107 138 IPR003690 GO:0003690|GO:0006355
Dere02g0594 395 SMART mt_12 179 210 IPR003690 GO:0003690|GO:0006355
Dere02g0594 395 SMART mt_12 215 245 IPR003690 GO:0003690|GO:0006355
Dere02g0594 395 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0594 Dere-ChrDere02 5683166 5684353 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere02g0594 mTERF 1.6e-24 No_clan