LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere02g0585	ATGTCTTCGGAAGAAGTAGTTGTGGAAAACAGCGATAACAATGAAGCGATATCGCAGAATCAGCGGGCTTCTGATCATTCTCGGCTCACAGGAAAGAAGCTTTCTTGGCAAAAGTTGCGCAGAAATGACTCTCTCGATGTGGAATCTCGCAGCTTCTCCAATCCTAACGCCCACTCCTCTAAGGGGCCACCTATGTCGGTGATATTGCATCTAGCGTTTCAAAGTATCGGAATAGTGTACGGTGACATCGGAACGTCGCCGCTTTACGTGTATGCGAGTACCTTCACCGGCGGCATCAATCATAACGACGACGTTTTGGGAGTTCTTTCCATGATCATTTACACCATTACTCTCATCCCTCTTATTAAATACGTTTTCATCGTTCTAAAGGCCAACGACAACGGCGATGGAGGGACATTCGCACTGTACTCTCTGATATGTCGTTATGCGAAAGTGGGGCTTATTCCGAACGAGCAATCGGAGGACGCAGAGGTGTCTAATTACCAGTTAGAGTTGCCCAATAGCAGCACAGTGAAGAGGGCTTCAAAAGTCAAATCAAAGCTTGAGAGTAGCCACTTTGCCAAGCTCTTCCTTTTGTTCGCTACCATGCTTGGTACTTCTATGGTCATTGGTGATGGTGTTCTCACTCCCTGCATTTCTGTTTTATCAGCTGTGGGAGGGATCAAGCAGGCTGCTAAATCGATAACAGACGATGGGGTTGTTTGGATATCCGTTGCAATTTTGGTGTGCCTCTTCATGGTTCAGAGATTTGGAACGGATAAAGTGGGCTACAGTTTTGCTCCCATTATCTGTATTTGGTTCACCTTCATCGGAGGCATTGGTATTTACAATTTTGTCAAGTATGATGCAACAGTCGTCAAAGCATTAAATCCCAAATACATTATAGATTATTTCAAAAGGAACAAGAAGGATGCTTGGATTTCCCTTGGTGGCGTTGTGCTGGCCATTACAGGAACTGAAGCACTATTTGCTGATGTTGGTCATTTCACGGTTCGGTCCGTACAAATAAGTATGTGCTCTGTGACATACCCTGCTCTTATATTGGCCTACGCTGGGCAAGCCTCCTTTCTTCGTAAACACAACGATCTTGTCGGAAACACCTTCTACGAGTCAATACCACACCCTTTATACTGGCCAATGTTTGTGATTGCCGTTGCAGCAGCAATCATAGCTTCTCAAGCCATGATTTCTGGGACTTTCTCTATAATCCAACAATCCCTTTCACTGGGTTGCTTTCCTCGTGTAAAGATCGTACACACATCGGCCAAGTACGAAGGACAAGTTTTCATCCCTGAAGTTAATTACATCTTGATGATAGCTTGTGTTGCTGTCACTCTTGGGTTTAAAACCACCACAAAAATTGGCAATGCCTACGGGATAGCTGTGGTATTTGTAATGACACTTACATCAGCTTTTCTTGTGCTTATCATGATCATGATATGGAAAACCCACATACTCCTAGTTATTGGCTATGTAGTTATATTCTGTTCTGTGGAGCTTCTGTATCTAAGCTCAGTACTATACAAATTTGACCAAGGAGGGTACCTTCCTCTTGCCTTCGCTGTGGTGCTTATGGCCATCATGTACATCTGGAACAATGTGTACCGAAGAAAGTACTACTTCGAGCTTGACAATAAGATTTCTCCCTCGAAGCTTAGGGAAATTGCTGCTGACAGACAGGTTTGCCGAATACCTGGTTTGGCCATATTCTACTCTGAGCTTGTTCAAGGCATACCACCTATTTTCAAGCACTATGTGGAAAATGTGCCTGCACTGCACTCTGTTCTTGTCTTCGTATCCATCAAGTCCCTACCTATTAGCAAAGTTGCTATGGAAGAGCGATTCCTTTTTCGCCGCGTGGAACCCAAAGAACTCTACGTGTTTCGTTGTGTTGCCAGATACGGATACACTGATGTGCGCAACGAGCACGAGCCTTTTGAGGGGCTGTTGGTTGAAAAATTGAAGGAATATATATCCAGAGAGTTTTTGGTGACGCAAAGAGTGGTCCAGAATGGTGAAGCTGAAGACAAATTGGAAGTTGGTGAAGGAGTACACGAGTCTTGTGACGAAGAGAAGCAACAAGAGGCTCTTGAAAGAGAGATTGAGGTAATAGAGAGAGCGAGGCGAGCAGGCGTCGTGCACTTGATTGGAGAGAACGAGGTGGTTGTTAGCAGAGGAGCCAACATAGGGAAGAAGATTTTGATCAATTATGCTTACAACTTTCTGAAGAAAAATTTGAGACAGAGTGACAAAGTGTTCGAAATTCCTCATAAGCGTATGGTCAAAGTAGGTATGACTTACGAGCTGTAG	2331	0.4432	MSSEEVVVENSDNNEAISQNQRASDHSRLTGKKLSWQKLRRNDSLDVESRSFSNPNAHSSKGPPMSVILHLAFQSIGIVYGDIGTSPLYVYASTFTGGINHNDDVLGVLSMIIYTITLIPLIKYVFIVLKANDNGDGGTFALYSLICRYAKVGLIPNEQSEDAEVSNYQLELPNSSTVKRASKVKSKLESSHFAKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKQAAKSITDDGVVWISVAILVCLFMVQRFGTDKVGYSFAPIICIWFTFIGGIGIYNFVKYDATVVKALNPKYIIDYFKRNKKDAWISLGGVVLAITGTEALFADVGHFTVRSVQISMCSVTYPALILAYAGQASFLRKHNDLVGNTFYESIPHPLYWPMFVIAVAAAIIASQAMISGTFSIIQQSLSLGCFPRVKIVHTSAKYEGQVFIPEVNYILMIACVAVTLGFKTTTKIGNAYGIAVVFVMTLTSAFLVLIMIMIWKTHILLVIGYVVIFCSVELLYLSSVLYKFDQGGYLPLAFAVVLMAIMYIWNNVYRRKYYFELDNKISPSKLREIAADRQVCRIPGLAIFYSELVQGIPPIFKHYVENVPALHSVLVFVSIKSLPISKVAMEERFLFRRVEPKELYVFRCVARYGYTDVRNEHEPFEGLLVEKLKEYISREFLVTQRVVQNGEAEDKLEVGEGVHESCDEEKQQEALEREIEVIERARRAGVVHLIGENEVVVSRGANIGKKILINYAYNFLKKNLRQSDKVFEIPHKRMVKVGMTYEL	776

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere02g0585	776	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	59	775	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere02g0585	776	Pfam	K+ potassium transporter	72	645	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere02g0585	776	Coils	Coil	697	717	-	-
	Dere02g0585	776	MobiDBLite	consensus disorder prediction	1	25	-	-
	Dere02g0585	776	NCBIfam	potassium uptake protein	71	775	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere02g0585	776	MobiDBLite	consensus disorder prediction	1	35	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere02g0585	Dere-ChrDere02	5595659	5600100	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere02g0585	12	776	Inorganic Solute Cotransporters	AT4G13420	55.303	0.0	877