Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0583 ATGAAGAGGAAAAGCCATAGCAGCAGGAGCAGCAGGGGAAGACGAAGTGGGAGGAAAGAGAGGAGCGAAATGAAGGGAACACTAGCTAGCCAATTGCAGATTCAGCTAGGGCAAGTCTCCCTCTTACCCCTACACCAACAGTCATTATCTTCCGCCATCCCTCACTTCCAGAACCTTCTCGAAGCCGAAGCCCGTGACAGCAATCTTCCGTCTTCTTCGTCTCACGCCGTGGACCATATGGTTGATGCCAATGTGGACGAGAAAGACTTCATTCTCAGCCAAGATTTCTTTTGCACCCCGGATTACATAACCCCGGATAATCAGTATATTTTTAACGGCTTGGATTGCAACAAGGAGAATATCCCGTGTCCTAAATCACCAGAGAAGCTAAATACTACAAAAAGCAAAAGATGCCGACTGGATGGTATCTCAGGAAACCCTCTCAGCCCTACCTTGTCTGGTGGCCATCAAGTTGTGGAGCTTGGAAATGACTCTGCTGCTGATGAAGTAGATATTGAGAAACTAGTTGCTGCTGGTAAACCAAAAGCACAAAATTATCTCTCACAGTCTGTGGTTGCCTTGCGCTCTAGGGTTATGCCTCCTCCTTGCATTAGGAACCCATATTTGAAAGATTCATTAGAAAAGGACATTGATCCCTATGGGAACCAAAGACCAAAATATGAAGGTATCTTCCCTGCAATTACTGGTGGTGATGGGCTTTCACGATATCGCGCTGACTTTCATGAGATTGAGCAAATTGGTAGAGGGAATTTTAGTAGTGTTTTCAAAGTATTAAAGAGAATCGATGGTTGCTTGTATGCTGTGAAACACAGCACAAGACAGTTGCGCCAGGAAACAGAAAGGAGAAAAGCTTTAATGGAAGTCCAAGCTTTGGCAGCCTTAGGCTCCCATGAAAACATCGTGGGATACTATTCTTCATGGTTTGAAAATGAGCAGCTGTACATCCAGATGGAGCTATGCGATCATAGCTTATCCATAAACAAGTCCGCTACATTGCTTACTGAAGGACTAGTATTAGAAGCATTGCATCAGGTTGCAAATGCATTGTGGTTTATACACGAAAAAGGAATAGCTCATCTTGATGTTAAACCTGATAATATTTATGTGAAAAATGGTGTTTATAAGCTTGGTGATTTTGGATGTGCAACTCTTCTTGATAAGAGCCTGCCAATTGAAGAGGGCGATGCACGTTATATGCCTCAGGAAATCCTGAATGAGAATTATGATCACCTTGACAAGGTTGATATATTTTCTTTGGGAGCTTCTATTTTTGAGCTCATTCGTGGATCGCGTTTGCCAGAATCTGGATATCAATTTTTTAATCTGAAAGAGGGCAGGTTGCCCCTCCTGCCTGGCCATTCATTGCAATTCCAGAACTTGCTCAAGGTCATGATGGACCCAGATCCGGTCAAGCGGCCTTCTGCAAGAGAGTTAGTGAAGAATCCAATCTTTGATTGGGCCTCAAAAACTGCTAAATGTTGA 1503 0.4365 MKRKSHSSRSSRGRRSGRKERSEMKGTLASQLQIQLGQVSLLPLHQQSLSSAIPHFQNLLEAEARDSNLPSSSSHAVDHMVDANVDEKDFILSQDFFCTPDYITPDNQYIFNGLDCNKENIPCPKSPEKLNTTKSKRCRLDGISGNPLSPTLSGGHQVVELGNDSAADEVDIEKLVAAGKPKAQNYLSQSVVALRSRVMPPPCIRNPYLKDSLEKDIDPYGNQRPKYEGIFPAITGGDGLSRYRADFHEIEQIGRGNFSSVFKVLKRIDGCLYAVKHSTRQLRQETERRKALMEVQALAALGSHENIVGYYSSWFENEQLYIQMELCDHSLSINKSATLLTEGLVLEALHQVANALWFIHEKGIAHLDVKPDNIYVKNGVYKLGDFGCATLLDKSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGASIFELIRGSRLPESGYQFFNLKEGRLPLLPGHSLQFQNLLKVMMDPDPVKRPSARELVKNPIFDWASKTAKC 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0583 500 MobiDBLite consensus disorder prediction 1 15 - -
Dere02g0583 500 SUPERFAMILY Protein kinase-like (PK-like) 240 492 IPR011009 -
Dere02g0583 500 MobiDBLite consensus disorder prediction 1 28 - -
Dere02g0583 500 ProSiteProfiles Protein kinase domain profile. 247 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0583 500 SMART serkin_6 247 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0583 500 Pfam Protein kinase domain 247 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0583 500 Gene3D Phosphorylase Kinase; domain 1 238 325 - -
Dere02g0583 500 ProSitePatterns Protein kinases ATP-binding region signature. 253 276 IPR017441 GO:0005524
Dere02g0583 500 Gene3D Transferase(Phosphotransferase) domain 1 326 494 - -
Dere02g0583 500 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 117 491 - -
Dere02g0583 500 FunFam Wee1-like protein kinase 326 495 - -
Dere02g0583 500 FunFam WEE protein kinase 237 325 - -
Dere02g0583 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 364 376 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0583 Dere-ChrDere02 5576688 5580844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0583 2 492 Core Cell Cycle Gene Families AT1G02970 60.765 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Dere02g0583 Pkinase 5.7e-47 CL0016