Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0572 ATGGTCGAAACCAGACGGAGTTCCTCTGCTTCCAAGCGCTGTCTCTCTTCGTCCCCTCCTTCCAACGCCAAACGACCCAAGGTGTCCGAGGATTCGTCATCAACAAGCCTGCCGTCAGTGGAAATTCTGGGTCCGGTCAACGAACCTGGAAATGAATCTCGAGAAACGGAGCTACGTCCGTCTGATCTACCACATACCGATTCGTTGAAAGCTGTAGATGTTTGTGATGCGATGCTACCTGAGAAATCTCCCGTTATGGCCGTCGAAGGCGAGGCTTTGGTGTCGCCGCAGCCTCTAGGTGAAACTGCGGTTGATGGGGAAAAATTAAAGGTGGTTGGAGTGGCTGCCGTTGGCCAGCCGAAGAAACGCTCGACAAAATCAACCAAAACCTGCCCAATGGCTTCATGGGGAAAGCTTCTTTCTCAGTGCTCTCAGAATCCACACCTGTCCATGTGCAGTTCTCAATTCACTGTTGGTCAAGGGCGTCAATGTAATTTATGGCTTAATGATCCGGCTGTTAGTAATGTTTTGTGCAAGTTGAGGCACATAGAGCTTGGTGGTTCATCTGTCGCGTTACTGGAAATCACAGGGGATAAAGGTACTGTCCAAGTTAATGGCAGGAATCATCAAAAATATTCCCACGTGATTTTAAGTGCAGGTGATGAGGTGGTCTTCAGTTCCTCTGACAAGAATGCTTATATTTTTCAGCAGCTCACCAATAATAATGTCACTACTTCTGGGATACCTTCTTCTGTAAGTATTTTAAAAGCCCAGAGTTCTCCAATAAAGGAAATTGATATTGAAGCTGGATCTGGGGACCCTTCAGCTGTTGCTGGAGCATCGACATTAGTGTCCTTATCTAATGTTCATAAAGATTTATCCATCCTTCCATCTTCTTCTAAAACTGGTGAGAATGTCCAACAGAATGCTGAGGTTTCATCACAACCTTCTGGCCATGGGGACGACACTCCAGATATTGAAATGAAGGATACCACCAATAATGGCGATCGAGCTGGAGTTGTTTCCACTGAGATTACTATTCTTGCATCCTCTGCCACTGCCAATGAAAATCTTAACCCTGGAAGTATGAAAGTAGATGCTGGTGTTGATGCAGGTGTTGGTAAGGTGACAGGGCCCTCTTTTGAGTTAGAGTCATTGTTGCGCAAGCTTGCTGGCTCCTGTCATGAATTTAATATAAATGACAGTATTTCAAAAATATTAGAACAAAGGGAATTAAGAGAGCTCCTTAAGGATGTTGATCCCCCAACTATTTTGGCATCCACCAGGCGACAAGCATTTAAGGACAGTTTACAACAAGGAATTCTCAAACCTGATGACATTGAGGTCTCGTTTGAAAGCTTTCCATATTATATAAGCGATACTACAAAAAATGTTTTGATTGCTTCTACGTACATTCATTTGAAGCAAAATAGCTTTGCAAAATTTGCTTCAGACCTTTCTTCATTGTGCCCACGAATTTTGTTATCTGGTCCTGCAGGGTCAGAAATATATCAGGAAACTTTGTCCAAGGCAGTTGCAAAGCATTTTGGTGCTAGGCTACTAATTGTGGATTCTTTTACCCTGCCTGGTGGAACACCAACAAAGGATGCTGATTCTGCTAAAGAAAGTTCAAGGCCTGAAAGAGTGTCTTTGTTTGCAAAGCGTAGTGCCCAGGCTGCCACATTACGGCATAAGAAACCAAATTCTAGTGTTGATGCTGATATTATTGATGGATCCTCATTCAGTTCTCAGGCTATGCTGAAACAAGAGGTATCTACTGCATCATCAAAAGGCCCTACTCTTAAAACTGGTGATCGAGTAAAATTTGTTGGCAACTTTCCCTCTGCTATCTCATCGTTACAAAATTATCCTTCAAGGGGACCAAGCTATGGCTCTCGGGGCAATGTTCTCCTTGCTTTTGAAGATAATGAGGCTTCAAAAATTGGGGTTAGATTTGATAAATCAATTCCTGATGGCAATGACCTTGGAGGCCTTTGTGAGGATGATCGTGGTTTCTTTTGTTATGCTAGTCATTTAATACAAGTAGATGGTTTCGGAGGGGATGACATTGACAAGCTTGCTATTAATGAAATCTTTGAGGTTGTCCTTGATCAGAGTAAATATGGTGCACTTGTGTTGTTTGTGAAAGATATAGAGAAGGCTATGATTGGTAACTCTGAAATTTTGAAAAGCAAACTTGAACGTTTGCCGCAAAATGTAGTTGTAGTTGGCTCACATATGCTGCCAGACAATCGTAAGGATAAGACCCAGCCTGGTGGCCTTCTATTTACAAAGTTTGGGAGTAATCAGACAGCACTACTTGATCTTGCTTTTCCGGATAACTTTAGTAGATTGCATGATAGGAGCAAGGAAACCTCCAAAGCAATGAAGCAACTCAGCCGCCTTTTCCCTAATAAAATATCCATACAGCAGCCGCAGGATGAGGCTTTGCTCTCTTATTGGAAGCAGCAGTTAGAACGTGATGTTGAAACTATGAAAGCTCAGTCAAATGTTGTCATCATCCACACAGTTCTTGACAGGTTTGGATTTATTTGCCCTGACCTTGAGAATCTTCGCATTAGAGATCAAGCCCTAACAACTGAAAGTGTGGAAAAAATCATTGGCTGGGCATTAAGTTACCGGCTTATGCATTTGATTGAAGACTCTATTAAAGACTCCAAGATCATCTTGTCTTCTGAAAGCATTAAGTATGGGCTGAACATTCTACAGGGCATCTTAGGTGAAAGTAAGAACTTAAAGAAATCACTTAAGGATGTGGTTACCGAAAATGAATTTGAGAAAAAATTGCTTGCTGATGTTATTCCACCAAGTGATATTAGGATCACATTTGATGATATTGGAGCCTTAGAAAACGTGAAGGATACCTTGAAGGAATTGGTCATGCTTCCCCTTCAGAGGCCTGAACTTTTTTCAAAAGGGCAGTTAACTAAGCCTTGCAAGGGAATATTGCTTTTTGGGCCCCCTGGCACTGGAAAAACAATGCTTGCAAAGGCTGTAGCAACTGAGGCTGGAGCAAATTTCATCAACATTTCAATGTCCAGCATTACTTCAAAGTGGTTTGGTGAAGGGGAGAAGTATGTCAAAGCAGTATTTTCTCTGGCAAGCAAAATTGCTCCAAGTGTTATTTTTGTTGATGAGGTTGATAGTATGTTAGGAAGACGTGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAGTTTATGGTGAATTGGGATGGTCTGCGTACAAAAGATAAGGAGCGTATACTCGTACTTGCAGCTACAAATAGGCCCTTTGACCTTGATGAGGCTGTTATTAGGAGGCTTCCACGAAGATTGATGGTTAATTTGCCAGATGCTCTGAACAGAGAAAAAATTCTTAAAGTAATTTTAGCAAGAGAAGATTTGGCACCTGATGTTGATTTGGAAGCAATATCAAACATGACTGATGGATATTCCGGTAGTGACCTAAAGAATCTATGTGTCACAGCGGCCCACCGTCCAATAAGAGAGATCTTGGAGAAGGAAAAGAAGGAGAGAAGTTTGGCACTGGCTGAGAATAGATCTTTACCTGCATTGTGTAGCAGTACTGATATTCGACCCTTAAAGATGGAGGATTTTAGATATGCGCATGAGCAGGTGTGTGCAAGCGTGTCGTCAGAGTCAACAAATATGAACGAGCTACTCCAGTGGAATGACCTTTATGGAGAAGGTGGATCAAGAAGAATGAAATCTTTGAGCTATTTTATGTAA 3762 0.4211 MVETRRSSSASKRCLSSSPPSNAKRPKVSEDSSSTSLPSVEILGPVNEPGNESRETELRPSDLPHTDSLKAVDVCDAMLPEKSPVMAVEGEALVSPQPLGETAVDGEKLKVVGVAAVGQPKKRSTKSTKTCPMASWGKLLSQCSQNPHLSMCSSQFTVGQGRQCNLWLNDPAVSNVLCKLRHIELGGSSVALLEITGDKGTVQVNGRNHQKYSHVILSAGDEVVFSSSDKNAYIFQQLTNNNVTTSGIPSSVSILKAQSSPIKEIDIEAGSGDPSAVAGASTLVSLSNVHKDLSILPSSSKTGENVQQNAEVSSQPSGHGDDTPDIEMKDTTNNGDRAGVVSTEITILASSATANENLNPGSMKVDAGVDAGVGKVTGPSFELESLLRKLAGSCHEFNINDSISKILEQRELRELLKDVDPPTILASTRRQAFKDSLQQGILKPDDIEVSFESFPYYISDTTKNVLIASTYIHLKQNSFAKFASDLSSLCPRILLSGPAGSEIYQETLSKAVAKHFGARLLIVDSFTLPGGTPTKDADSAKESSRPERVSLFAKRSAQAATLRHKKPNSSVDADIIDGSSFSSQAMLKQEVSTASSKGPTLKTGDRVKFVGNFPSAISSLQNYPSRGPSYGSRGNVLLAFEDNEASKIGVRFDKSIPDGNDLGGLCEDDRGFFCYASHLIQVDGFGGDDIDKLAINEIFEVVLDQSKYGALVLFVKDIEKAMIGNSEILKSKLERLPQNVVVVGSHMLPDNRKDKTQPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETSKAMKQLSRLFPNKISIQQPQDEALLSYWKQQLERDVETMKAQSNVVIIHTVLDRFGFICPDLENLRIRDQALTTESVEKIIGWALSYRLMHLIEDSIKDSKIILSSESIKYGLNILQGILGESKNLKKSLKDVVTENEFEKKLLADVIPPSDIRITFDDIGALENVKDTLKELVMLPLQRPELFSKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDALNREKILKVILAREDLAPDVDLEAISNMTDGYSGSDLKNLCVTAAHRPIREILEKEKKERSLALAENRSLPALCSSTDIRPLKMEDFRYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRRMKSLSYFM 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0572 1253 Gene3D - 1121 1215 - -
Dere02g0572 1253 Gene3D - 947 1227 IPR027417 -
Dere02g0572 1253 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 431 1252 - -
Dere02g0572 1253 Pfam AAA+ lid domain 1142 1178 IPR041569 -
Dere02g0572 1253 ProSitePatterns AAA-protein family signature. 1092 1111 IPR003960 GO:0005524|GO:0016887
Dere02g0572 1253 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 947 1123 - -
Dere02g0572 1253 MobiDBLite consensus disorder prediction 295 337 - -
Dere02g0572 1253 MobiDBLite consensus disorder prediction 1 41 - -
Dere02g0572 1253 MobiDBLite consensus disorder prediction 295 320 - -
Dere02g0572 1253 Pfam ATPase family associated with various cellular activities (AAA) 989 1118 IPR003959 GO:0005524|GO:0016887
Dere02g0572 1253 CDD RecA-like_ATAD1 952 1118 - -
Dere02g0572 1253 SMART AAA_5 985 1122 IPR003593 GO:0016887
Dere02g0572 1253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 948 1227 IPR027417 -
Dere02g0572 1253 SUPERFAMILY SMAD/FHA domain 135 228 IPR008984 GO:0005515
Dere02g0572 1253 MobiDBLite consensus disorder prediction 52 66 - -
Dere02g0572 1253 Gene3D - 135 245 - -
Dere02g0572 1253 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0572 Dere-ChrDere02 5448049 5460155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0572 984 1189 Calmodulin-binding Proteins AT3G56690 36.190 1.75e-31 132