Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0564 ATGCCTTCTGAAAGCTGGATTACATCCCTCTCCTGTGTGTCCCCTGTAAAACAAGCCTCAGGGGATACGTTCTTTTCGACTCTACCTCAGTGGCTAAGATTTGTTTTCCTCTCTCCATGTCCTCAGAGAGCTCTCTTGTCAGCCGTTGACGTTTTACTCCTTGTCGTCCTCTTCGTGTTTGCCGTCAAGAAGCTCTATTCTAGGTTCACCTCTAATGGCAGCGGCCCCGCGACCTCTGAACTTAACAAGCCCCTAATCGGACATGAAAGAGCTTCTGTCAAAACAACTACGTGGTTTAGGCTAACTCTAACTGCTTCCGTTGTTTTGGCTATATTGTACACTGTCGCTTGTGTTCTGGTATTTGCCGGAGAAACCCAAGTCCCATGGACGCTAGTTGATGGACTATTCTGGTTAGTTCAAGCCGTGACTCATGCGATTCTTGCAATCTTAATCATTCATGAGAAAAGATTTGAAGCTGTTTCTCACCCGATTCCACTTCGAGTCTTTTGGATTGCAAACTTCATCATCACTTCTTTGTTCGTAGCGTCCGGAGTTATACGTTTGGTTTCCGTGGAAGAAACTGAAGACTTTAGCTTTAAGACGGATGATATTGTCTCTTTCATTTCTTGCCCTCTGTCCCTTTTTCTCTTTTCTGTTGCGATTAAAGGATCTACTGGCATTAGGTCGACCCATGAAACACAACCATTGATTGATGGGGAAATTAATTTATATGATCCTACTCTGAGCAAATCGAACGTGACTGGCTTTGCTTCAGCTTCTTTTGCATCCAAGGCCTTTTGGCTATGGATAAATCCATTGTTGAGTAAAGGGTACAAGACGCCTCTGAAGATTGACGAGATTCCATCACTTTCGCCAGAACATAGAGCTGAAAGGATGTCAGTATTGTTTGAATCGAAATGGCCTAAGCCACAAGAAAGGTCGAAGCACCCTGTTCTAACCGCATTGCTCCGATGCTTCTGGATAGAAGTAGCATTCACTGCGCTCCTTGCGATCATTCGGCTCTGTGTCATGTTCGTAGGCCCGGTTCTGATCCAAAATTTTGTTGATTACACTGCAGGGAAGGGTAGCTCTATATATGAAGGATACTACCTCGTGTTAATCCTACTCATTGCAAAATTTATAGAAGTCTTGACCACTCACCATTTCAACTTCAACTCTCAGAAACTCGGAATGCTTATCCGGTGCACTCTCATTACCTCATTGTACAAAAAGGGGCTAAGGTTGTCGTGCTCTGCTCGACAGGACCACGGTGTCGGAACTATTGTGAATTACATGGCAGTCGATGCACAACAGCTCTCCGATATGATGCTGCAGCTACATGCCGTGTGGATGATGCCATTTCAAGTTGGGATATCCTTATTACTGCTTTACAATTACTTAGGTGCCGCAGTAGTCACAGCTCTGCTTGGAATTTTGGGAGTTCTTGTATTTGTTGTGTTTGGTACTAGGAGAAACAATCGTTTCCAATTCAATGTGATGAGCAATCGCGATTCAAGAATGAAAGCTGTGAATGAGATGCTAAATTACATGCGGGTGATTAAGTTCCAAGCATGGGAAGAGCATTTCAATAAGAGGATTATGGGTTTCCGTCAGTCGGAATTTGAATGGCTTTCTAAGTTTATGTATTCAATTTCTGGCAATATCATTGTGATGTGGAGCACACCATTATTGATATCAACTCTGACGTTTGGGACGGCAATTTTGCTTGGAGTTCCACTTGACGCAGGAACGGTTTTCACTACAACAACAATCTTTAGAATATTGCAAGAGCCTATTAGGACGTTTCCACAATCAATGATCTCTCTTTCACAAGCAATGATATCACTTGGGAGGTTGGATCGGTATATGATGAGCAGGGAATTATCGGATGACTCAGTGGAGAGGGAGGAAGGTTGTGGTGGACGAACCGCTGTGGAGGTGGAAGATGGGATCTTCAGCTGGGACGATGATGGAAAGGGAAATTACGACTTGAAAAACATTAATTTGGAGATCAAAAAGGGTGATCTTACGGCTATTGTTGGGACTGTGGGCTCGGGAAAGTCTTCTCTCCTTGCATCAGTTCTTGGTGAGATGCACAAAATTTCTGGGAAGGTTCGGGTTTGTGGGAGTGTTGCGTATGTAGCACAAACATCATGGATTCAAAATGGGACAATTCAGGAGAACATCCTGTTTGGATTACCAATGGACAGACAGAAATACAATGAAATTGTGAGAGTATGTTGCTTGGAGAAGGACTTGGAAATGATGGAGGATGGGGATCAGACAGAGATAGGAGAGCGTGGCATCAACCTTAGTGGAGGCCAGAAGCAGCGGATACAACTTGCCAGGGCTGTATATCAAGATCGTGATATCTATCTTCTTGACGATGTCTTCAGCGCTGTGGATGCTCATACCGGCTCTGAAATATTCAAGGAATGTGTGAGGGGAGTTCTAAAAGGCAAGACCGTTATTCTTGTGACACACCAAGTAGACTTCTTGCATAATGTTGATCTTATACTAGTTATGAGAGATGGAATGATAGTCCAATCCGGGAAGTACAATGATCTATTAAATTCCGGAATGGATTTTGGAGCTCTGGTAGCTGCACATGAGACTTCCATGGAACTTGTAGAACAGGGTGCAGTAATGCCTGGTGAAACTTCTCCTAAACCATCCAAGTCTCCCAGATCTCCAAAGCCAACTTCTAGTTATGAGGAAACCAATGGTGACAGCAATTATCTTGACCAGCCCAAGGCTAGCAAGGAAAGTTCTAAACTCATCAAAGATGAGGAGAGGGAAACTGGCAAAGTGAGCTTGCATATCTATAAACTGTATTGCACTGAGGCTTTTGGGTGGTGGGGCATTACAGGAGTATTGGTCCTTTCTTTGTTATGGCAAGCATCTTTGATGGCAGGTGACTATTGGCTTGCATATGAAACCTCAGCAGAGCGAGCGCAGTTGTTTGACCCTTCTCTGTTTATCACCGTCTATGCAATTATTGCTGTAGTTTCAGTTGTTTTGGTGGTCGCAAGAGCCTTCTCCTTCACCATTATGGGGCTTAAGACAGCACAAATTTTCTTCACTCAAATTCTTCACTGTATCTTGCATGCCCCCATGTCTTTCTTTGATACTACGCCTTCGGGAAGAATTTTGAGTAGGGCATCCACTGATCAGACCAATGTTGATGTCTTTCTCCCCTTGTTTGTGGGTATTGTTATTGCGATGTACATCACAGTGCTCGGCATCTTCATCGTTACATGTCAAAATTCTTGGCCAACAGTTTTCTTGTTGATTCCTCTTGCTTGGTTGAATATATGGTACCGGGGTTATTTCCTCGCTTCATCTCGCGAATTGACTCGCCTGGATTCAATAACAAAAGCACCTGTCATTCATCACTTCTCAGAAAGCATTTCGGGGGTCATGACAATCCGTGCGTTTAAGAAGCAGGGGATGTTTTGTGAAGAAAATGTTAAACGAGTGAATGCTAATTTGCGAATGGATTTCCACAACAATGGTTCCAATGAGTGGTTGGGTTTCCGCTTAGAATTGCTCGGAAGCCTTGTCTTTTGCTTCTCTGCATTGTTTATGATCATGTTACCCAGCAATATCATAAAGCCAGAAAATGTTGGTTTATCTCTCTCTTATGGATTGTCCCTGAACGCTGTGTTGTTCTGGGCTATATACATGAGCTGCTTCATTGAGAACAAAATGGTATCTGTTGAGAGGATTAAGCAATTCACGAAAATTCCACCAGAAGCAGCATGGCATATTGGAGACCGTCTTCCTCCTCCAAATTGGCCTGCCCAAGGCAATGTTAATATCAAAGACCTGCAGGTCAGATATCGTCCCAACACTCCTCTGGTTTTAAAAGGCATCACTTTGAGCATTAGTGGAGGCGAGAAGATTGGTGTTGTTGGTCGAACAGGGAGTGGAAAATCAACTTTAATTCAAGTTTTCTTTAGGCTGGTGGAACCTTCAGGGGGCAGAATAATCATTGATGACATCGACATAACAGCCTTAGGGCTTCACGATCTCAGGTCTCGATTTGGTATCATTCCCCAAGAACCTGTCCTTTTCGAGGGAACCGTCAGAAGTAATATTGATCCAACTGGACAGTATACAGATGAAGAGATATGGAAGAGCCTGGAACGCTGCCAACTAAAAGATGCTGTGGCTTCTAAGCCTGAGAAACTTGACTCTTTAGTGGTTGATAGTGGAGAGAATTGGAGTGTGGGACAGAGGCAGTTGCTGTGTCTTGGGAGGGTTATGCTTAAGCGAAGCCGTCTCTTGTTCATGGACGAAGCAACGGCTTCTGTGGACTCACAAACTGATGCTGTGATTCAAAGGATAATCAGAGAGGACTTTGCAGCATGTACCATCATTAGCATTGCTCACAGAATACCAACAGTCATGGACTGTGATAGGGTTCTGGTCGTAGATGCAGGGCGAGCAAAAGAATTTGATAAACCCTCCAACTTGCTTCAAAGGCCATCGCTGTTTGGGGCATTAGTTCAAGAATATGCCAACCGTTCTTCTGGACTCTGA 4545 0.4392 MPSESWITSLSCVSPVKQASGDTFFSTLPQWLRFVFLSPCPQRALLSAVDVLLLVVLFVFAVKKLYSRFTSNGSGPATSELNKPLIGHERASVKTTTWFRLTLTASVVLAILYTVACVLVFAGETQVPWTLVDGLFWLVQAVTHAILAILIIHEKRFEAVSHPIPLRVFWIANFIITSLFVASGVIRLVSVEETEDFSFKTDDIVSFISCPLSLFLFSVAIKGSTGIRSTHETQPLIDGEINLYDPTLSKSNVTGFASASFASKAFWLWINPLLSKGYKTPLKIDEIPSLSPEHRAERMSVLFESKWPKPQERSKHPVLTALLRCFWIEVAFTALLAIIRLCVMFVGPVLIQNFVDYTAGKGSSIYEGYYLVLILLIAKFIEVLTTHHFNFNSQKLGMLIRCTLITSLYKKGLRLSCSARQDHGVGTIVNYMAVDAQQLSDMMLQLHAVWMMPFQVGISLLLLYNYLGAAVVTALLGILGVLVFVVFGTRRNNRFQFNVMSNRDSRMKAVNEMLNYMRVIKFQAWEEHFNKRIMGFRQSEFEWLSKFMYSISGNIIVMWSTPLLISTLTFGTAILLGVPLDAGTVFTTTTIFRILQEPIRTFPQSMISLSQAMISLGRLDRYMMSRELSDDSVEREEGCGGRTAVEVEDGIFSWDDDGKGNYDLKNINLEIKKGDLTAIVGTVGSGKSSLLASVLGEMHKISGKVRVCGSVAYVAQTSWIQNGTIQENILFGLPMDRQKYNEIVRVCCLEKDLEMMEDGDQTEIGERGINLSGGQKQRIQLARAVYQDRDIYLLDDVFSAVDAHTGSEIFKECVRGVLKGKTVILVTHQVDFLHNVDLILVMRDGMIVQSGKYNDLLNSGMDFGALVAAHETSMELVEQGAVMPGETSPKPSKSPRSPKPTSSYEETNGDSNYLDQPKASKESSKLIKDEERETGKVSLHIYKLYCTEAFGWWGITGVLVLSLLWQASLMAGDYWLAYETSAERAQLFDPSLFITVYAIIAVVSVVLVVARAFSFTIMGLKTAQIFFTQILHCILHAPMSFFDTTPSGRILSRASTDQTNVDVFLPLFVGIVIAMYITVLGIFIVTCQNSWPTVFLLIPLAWLNIWYRGYFLASSRELTRLDSITKAPVIHHFSESISGVMTIRAFKKQGMFCEENVKRVNANLRMDFHNNGSNEWLGFRLELLGSLVFCFSALFMIMLPSNIIKPENVGLSLSYGLSLNAVLFWAIYMSCFIENKMVSVERIKQFTKIPPEAAWHIGDRLPPPNWPAQGNVNIKDLQVRYRPNTPLVLKGITLSISGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDDIDITALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTGQYTDEEIWKSLERCQLKDAVASKPEKLDSLVVDSGENWSVGQRQLLCLGRVMLKRSRLLFMDEATASVDSQTDAVIQRIIREDFAACTIISIAHRIPTVMDCDRVLVVDAGRAKEFDKPSNLLQRPSLFGALVQEYANRSSGL 1514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0564 1514 Gene3D - 1257 1504 IPR027417 -
Dere02g0564 1514 CDD ABCC_MRP_domain2 1270 1490 - -
Dere02g0564 1514 Pfam ABC transporter 664 797 IPR003439 GO:0005524
Dere02g0564 1514 Pfam ABC transporter 1289 1437 IPR003439 GO:0005524
Dere02g0564 1514 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 331 611 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere02g0564 1514 FunFam ABC transporter C family member 5 918 1253 - -
Dere02g0564 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1264 1505 IPR027417 -
Dere02g0564 1514 CDD ABC_6TM_ABCC_D2 955 1247 IPR044726 GO:0140359
Dere02g0564 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1272 1506 IPR003439 GO:0005524
Dere02g0564 1514 MobiDBLite consensus disorder prediction 881 927 - -
Dere02g0564 1514 Pfam ABC transporter transmembrane region 966 1208 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere02g0564 1514 Pfam ABC transporter transmembrane region 333 598 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere02g0564 1514 CDD ABC_6TM_ABCC_D1 332 619 IPR044746 GO:0140359
Dere02g0564 1514 Gene3D ABC transporter type 1, transmembrane domain 918 1253 IPR036640 GO:0005524|GO:0016020
Dere02g0564 1514 Gene3D ABC transporter type 1, transmembrane domain 304 623 IPR036640 GO:0005524|GO:0016020
Dere02g0564 1514 FunFam ABC transporter C family member 3 1255 1506 - -
Dere02g0564 1514 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 257 1508 - -
Dere02g0564 1514 CDD ABCC_MRP_domain1 645 845 - -
Dere02g0564 1514 ProSitePatterns ABC transporters family signature. 771 785 IPR017871 GO:0005524|GO:0016887
Dere02g0564 1514 SUPERFAMILY ABC transporter transmembrane region 313 623 IPR036640 GO:0005524|GO:0016020
Dere02g0564 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 643 866 IPR027417 -
Dere02g0564 1514 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 645 869 IPR003439 GO:0005524
Dere02g0564 1514 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 957 1235 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere02g0564 1514 FunFam ABC transporter C family member 4 628 887 - -
Dere02g0564 1514 MobiDBLite consensus disorder prediction 897 919 - -
Dere02g0564 1514 SUPERFAMILY ABC transporter transmembrane region 952 1252 IPR036640 GO:0005524|GO:0016020
Dere02g0564 1514 FunFam ABC transporter C family member 10 314 627 - -
Dere02g0564 1514 Gene3D - 624 882 IPR027417 -
Dere02g0564 1514 SMART AAA_5 1298 1482 IPR003593 GO:0016887
Dere02g0564 1514 SMART AAA_5 673 854 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0564 Dere-ChrDere02 5381896 5387562 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0564 664 862 Calmodulin-binding Proteins AT2G36910 31.628 2.27e-23 106