Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0553 ATGATCAGAATATCATACTTTGTGTTTCTTCTGCTTGTGTTCTTGTTTCCTTCATTTTTCACAAATGCAGGCCAACTAGTCTCTGCAAAAGGTAACGATTATGTCAGAGACGCATGCACAGTGACTAGGTACCCTGACCTATGTATCCGCGCGCTAGCACCGTTTTCTAACACAGCCAGAAGGAGCCCAAGCAAGTGGGCCCGAGCAGGAGTGTCGGTGACAATAAGTGAGGTTAAGAATGTTCAGGCATATCTTGCAAAGTTGAGGAGATACAGTCGTATGAGTGGAAGAGACAGAGTTGCCCTTTCAGATTGTACTGAGTCATTTGGGAATGCACTTGACGAGCTTCACAGGTCCCTCGGTGTGCTCAGAAGGCTAAGCAGAAGCACATTTGGTACCCAAATGGGGGATCTCAATACATGGATAAGTGCAGCTCTCACTGACGAAGATACTTGCCTTGATGGGTTTGAAGGCCAAGAGGGCAAGGAAATAAAATTGCTGCAGAATCGGGTTCAGAAAGTCTCCTTTATGACCAGTAATGCTCTAGCTCTTGTCAACAAACTAGCCACTACAGGCTTGGGTAGCATCACTGATCCATAG 600 0.4617 MIRISYFVFLLLVFLFPSFFTNAGQLVSAKGNDYVRDACTVTRYPDLCIRALAPFSNTARRSPSKWARAGVSVTISEVKNVQAYLAKLRRYSRMSGRDRVALSDCTESFGNALDELHRSLGVLRRLSRSTFGTQMGDLNTWISAALTDEDTCLDGFEGQEGKEIKLLQNRVQKVSFMTSNALALVNKLATTGLGSITDP 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0553 199 Pfam Plant invertase/pectin methylesterase inhibitor 34 184 IPR006501 GO:0004857
Dere02g0553 199 SMART PMEI_2 30 184 IPR006501 GO:0004857
Dere02g0553 199 CDD PMEI-like_3 38 190 - -
Dere02g0553 199 NCBIfam pectinesterase inhibitor domain 7 188 IPR006501 GO:0004857
Dere02g0553 199 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 188 IPR035513 -
Dere02g0553 199 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 184 - -
Dere02g0553 199 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 190 IPR035513 -
Dere02g0553 199 FunFam Pectinesterase inhibitor 3 30 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0553 Dere-ChrDere02 5305879 5306478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0553 22 195 Carbohydrate Esterase AT3G14310 32.402 1.23e-23 95.9