Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0535 ATGCCTTTTCTATCTCAATCGCAGGGAATCGATTTGAAAGCAGGAGGTAAGAGCAAGAAGACCCGACGAACTGCCCCCAAATCTGACGATATTTACCTGAAACTCCTTGTCAAGGTTTCTTCTTTATCTGAGTTTCCAGTCTTCCTTCCCTTTCTGTTTCGCGAATGCCCAAGTACTGTATGCATTGCACTCCATATCCGCGTCTGGACTGGGAGTAATTTCAATTCAGTTATCCTGAAGCGGCTTTTCATGAGCATAATCAACAAGCCACCTCTATCTCTCTCTAGGTTGATTCGTTTCATGAAGGGCAAGGTTCTTCTTAGAGGTCCCAAGAATGCCCGCGAGGCTTTCAAGCATTTCGGACCAGCTCCTGGTGTGCCACATAGTCACACCAAGCCTTATGTCCGTTCAAAAGGAAGGAAATTTGAGCGGGCCAGAGGAAGAAGGAACAGTAAAGGCTTTAGAGTTTGA 471 0.4607 MPFLSQSQGIDLKAGGKSKKTRRTAPKSDDIYLKLLVKVSSLSEFPVFLPFLFRECPSTVCIALHIRVWTGSNFNSVILKRLFMSIINKPPLSLSRLIRFMKGKVLLRGPKNAREAFKHFGPAPGVPHSHTKPYVRSKGRKFERARGRRNSKGFRV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0535 156 Pfam Ribosomal protein 60S L18 and 50S L18e 9 103 IPR021131 -
Dere02g0535 156 Pfam Ribosomal protein 60S L18 and 50S L18e 104 156 IPR021131 -
Dere02g0535 156 Gene3D - 64 103 - -
Dere02g0535 156 Gene3D - 104 156 - -
Dere02g0535 156 Gene3D - 8 44 - -
Dere02g0535 156 PANTHER 60S RIBOSOMAL PROTEIN L18 103 156 IPR000039 GO:0003735|GO:0005840|GO:0006412
Dere02g0535 156 MobiDBLite consensus disorder prediction 133 156 - -
Dere02g0535 156 MobiDBLite consensus disorder prediction 127 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0535 Dere-ChrDere02 5145694 5147238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0535 10 156 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 44.920 4.03e-36 121