Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0531 ATGGCTTTCAATCTCCCAACAACATCATTTTTCCTTCTTCCTCTACTCTTTGCCTCTCTAGCTTTTGCTGATTCCCCGCCCACCAATTCTGTCTCTCCTGCAACCATATGTCAGTCTACCCCTGACCCTTCTTATTGCAAGTCCGTGCTTTCTTCCCAAAACGGCACCGTCTACGACTATGGTCGCTTTTCTGTCCGATCTTCATTATCACAGGCCCGCAAATTCTTGTTCCTCGTCGACAAGTATCTCCGACGACGCTCCTCTTTGTCCACGGCCGCCGCCGCCGCACTCGAAGATTGTCGAACACTCGCCGACTTGAACCTTGATTTTCTCTCACGTTCCTTTTGGACCGTGAATAATACAACTAGGTTTCTGCCCAATTTCGAAGCTGACAGTATCCAAACATTGCTCAGTGCCATTTTAACCAACCAGCAAACCTGCTTGGATGGCCTTCTAGACACTGCTGCTCCTCGGAGCATGAGAAATGGGCTCTCTGTCCCACTCTCTAACGACACCAAGCTTTACAGCGTCTCTTTAGCCCTCTTTACAAAGGGCTGGGTCCCCAGAAATCAGACGAAACCAAAACCTATATCATCTCGCCAGCAACCTCCCAAGAAACCACCTGCAATATTCCAAAACGGTCGTTTGCCTCTTGCGATGACAAGCAGATCACGCGCCATCTACGAGGCTGTGAGTCGGAGAAACCTTGGCCAGAGTGCTGCTGGCAAGGTACTGGTGAAAGACATCGTGACGGTGAGTCAAGACGGAACCGGAAACTTCACCACCATCAACGGCGCCGTTTCTGCAGCTCCCAACATGTCTTCCCCTGCAAATGGCTACTTCTTGATCTATGTCACGGCAGGCGTTTACGAAGAATACATCTCCATCGGTAAGAAAAAAACCAACTTGATGATGATCGGAGACGGTATAAACAAGACCATCATCACAGGCAATCGTAGCGTCGCAGATGGGTGGACAACCTTCAAATCTGCAACCTTCGCCGTGGTGGCCTCAAGATTCGTGGGGGTGAACATAACATTTCGCAACACGGCAGGGCCGGAGAAGCACCAAGCGGTGGCAGTTCGAAACGGGGCAGATCTGTCAACGTTTTATAGCTGCAGCTTTGAGGGATACCAAGACACCTTATACACTCATTCCCTGAGACAATTCTACAGAGAATGTGACATCTACGGCACAGTAGATTTCATATTCGGCAACGCAGCGGTTGTGCTCCAAAACTGCAACATCTTCGCTCGTCAGCCTATGATAGGGCAATTCAACGCCATAACCGCACAGGGTCGAACCGACCCGAATCAGAACACGGGGATCTCGATACATAATTGTACGGTCAGAGCGGCTGATGATCTGGCAGCGAACATTAATGTGGCAGCGACATACTTGGGAAGGCCGTGGAAGCAGTACTCGAGGACGGTTTACATGCAGAACTTGATGGAGAGTGTGATAGATGGGGTGGGTTGGCATGCATGGGATGGCGATTTTGCGTTAAGCAGCTTGTATTACGCTGAGTTTAATAATAGGGGGTCAGGGTCCGGCACCGCCAGGAGGGTGACGTGGCAGGGTTACCATGTGATTAACGCTACGGAGGCAGCTAATTTCACGGTCTCCAACTTCTTGCTTGGGGATCTATGGTTGCCCTCCACTGGAGTCACTTACGTCAGTGACTTGATTTGA 1692 0.5035 MAFNLPTTSFFLLPLLFASLAFADSPPTNSVSPATICQSTPDPSYCKSVLSSQNGTVYDYGRFSVRSSLSQARKFLFLVDKYLRRRSSLSTAAAAALEDCRTLADLNLDFLSRSFWTVNNTTRFLPNFEADSIQTLLSAILTNQQTCLDGLLDTAAPRSMRNGLSVPLSNDTKLYSVSLALFTKGWVPRNQTKPKPISSRQQPPKKPPAIFQNGRLPLAMTSRSRAIYEAVSRRNLGQSAAGKVLVKDIVTVSQDGTGNFTTINGAVSAAPNMSSPANGYFLIYVTAGVYEEYISIGKKKTNLMMIGDGINKTIITGNRSVADGWTTFKSATFAVVASRFVGVNITFRNTAGPEKHQAVAVRNGADLSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIFARQPMIGQFNAITAQGRTDPNQNTGISIHNCTVRAADDLAANINVAATYLGRPWKQYSRTVYMQNLMESVIDGVGWHAWDGDFALSSLYYAEFNNRGSGSGTARRVTWQGYHVINATEAANFTVSNFLLGDLWLPSTGVTYVSDLI 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0531 563 NCBIfam pectinesterase inhibitor domain 10 182 IPR006501 GO:0004857
Dere02g0531 563 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 184 IPR035513 -
Dere02g0531 563 Gene3D - 244 562 IPR012334 -
Dere02g0531 563 MobiDBLite consensus disorder prediction 190 212 - -
Dere02g0531 563 FunFam Pectinesterase 34 184 - -
Dere02g0531 563 Pfam Plant invertase/pectin methylesterase inhibitor 34 181 IPR006501 GO:0004857
Dere02g0531 563 PANTHER PECTINESTERASE 20 552 - -
Dere02g0531 563 SMART PMEI_2 28 181 IPR006501 GO:0004857
Dere02g0531 563 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 184 IPR035513 -
Dere02g0531 563 CDD PMEI-like_3 35 186 - -
Dere02g0531 563 FunFam Pectinesterase 243 562 - -
Dere02g0531 563 SUPERFAMILY Pectin lyase-like 247 560 IPR011050 -
Dere02g0531 563 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Dere02g0531 563 Pfam Pectinesterase 250 548 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0531 Dere-ChrDere02 5118819 5120612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0531 8 563 Carbohydrate Esterase AT4G02330 61.888 0.0 699