Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0516 ATGTCCATAATTCTAAGGTTCTTCTCTGCAAGGCTAGTGCAATTGCCAATATGTCCATATGTTCTCTATGCTTTCTTCGCCGTGTCCTTTTACAAAACTTATTTAATTGTATATGTAGGAGTTATTACTACCACATTTGTATGTCCATTGGATGTCATCAAAACTAGGTTTCAAGTCCATAGGTTGCCACAGTTTGCTAATGGAAGTATTAAAGGAAGTCTGATATTTGGTAGTTTAGAACAAATATTTCACAAGGAGGGGTTATACGGCATGTACCATGGTCTGGCTCCCACTGTGTTGGCACTACTTCCAAACCAGGCGGTTGTTAGTAGCTTAGCTTACTATTTGATTATCCATTTTATTGGGCTCTATAAATCTCCATATGCTACTGGTGTTGAGCCTGTTTGCTTTGTTTTTGGGGAAACAAAGACTGATGAACACCATCATTTCTCAATTGGAGCTAACATGACAGCTGCTATCGGTGCTAGGGCTACAACTACCATTGCCACAAATCCACTTTGGGTTGTCAAGACCAGACTTCAAGGAATGAGGCCTGGTGTTATGCTATATAGGAGCATACTATCTGCTCTAAGGAGAATTGCTCATGAGGAAGGCATTCGGGGGTTGTACAAGTTGTGTATGGTGAATGCCAATGTCTATGGCTTTACAAATAGTAATCTTGTTTGA 687 0.4017 MSIILRFFSARLVQLPICPYVLYAFFAVSFYKTYLIVYVGVITTTFVCPLDVIKTRFQVHRLPQFANGSIKGSLIFGSLEQIFHKEGLYGMYHGLAPTVLALLPNQAVVSSLAYYLIIHFIGLYKSPYATGVEPVCFVFGETKTDEHHHFSIGANMTAAIGARATTTIATNPLWVVKTRLQGMRPGVMLYRSILSALRRIAHEEGIRGLYKLCMVNANVYGFTNSNLV 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0516 228 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 39 213 IPR044712 GO:0006862|GO:0055085
Dere02g0516 228 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 119 IPR018108 -
Dere02g0516 228 ProSiteProfiles Solute carrier (Solcar) repeat profile. 150 228 IPR018108 -
Dere02g0516 228 Gene3D Mitochondrial carrier domain 36 221 IPR023395 -
Dere02g0516 228 Pfam Mitochondrial carrier protein 39 118 IPR018108 -
Dere02g0516 228 Pfam Mitochondrial carrier protein 151 215 IPR018108 -
Dere02g0516 228 SUPERFAMILY Mitochondrial carrier 39 211 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0516 Dere-ChrDere02 4996831 4999277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0516 45 210 Chloroplast and Mitochondria Gene Families AT2G47490 55.952 8.43e-49 160