Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0498 ATGGGAAGAGCACCTTGTTGTGAGAAAGTGGGGTTGAAGAAGGGTCGATGGACTGCACAAGAGGACGAAATCTTGACCAAGTACATTCAGGCCAATGGGGAAGGCTCTTGGAGGTCATTGCCCAAGAATGCAGGTCTGCTAAGGTGTGGGAAGAGCTGCAGACTACGATGGATCAATTACTTGAGGGCCGACATTAAAAGAGGCAACATTTCTGCTCAAGAGGAAGAGATCATTATTAAACTCCATGCTTCTGTGGGCAACAGAAAGATCTACGCTTTCAGAAGGCCAGCTAGTATGGATCAGACTCAGCCAGTAGTGACCATGGAGACACATATGCCCAAAGCAAACAGTGTACCAACCAAGCGAAAGGGTGGCAGAACCAGCCGTTGGGCCATGAAGAAGAACAGAAGCGTGACCCAAAAGGCTGCGGAGAGACCCGAAGAAACCAGTGTTAGTGTTCCTAATCAGAATAATATAGTAGCAGTTCCAGTGCCACCTACCCCAGCATTAGAGAACGAGGGCTTGTCTATAGCTGATGATGCCATAGAGCTAGAGGATTTCATGGTTTTGGAGGGTGATACCGAAATGGCTTACGAGGTAGTTGAAGGGAGCGTACTGAGGGGGGATGGAGACAAAGAAACAGAGACCTTACAAGGGTGTCAGGAAGGCATTGATGGTGGTGGGGTGTTGAGTTTTAATGACATGGTGGACACTTGTTTACTGGAAGAGGGAGGAGGTGGGGTTTTGAACATAAGTGGAGAGGGAATTGAAGGGGAGAATACATGTGCTGATAACAAAATGGCAACAAGTGATCAGGAGATAGAGAATGGTACTAATGGGAAAATTACTGAAGAGTGGCATTCTTCGGCGTTTGAACATGATTACTGGGATATCTGGGAGAGTAGTGTCGAGCAATCGAAACCAAATGAATGGGAATCATGGGAGGACAAGCAAAACCTGCTGTCATGGCTCTGGGAAGATGATGATTGGGAAAGCGATTGTCAGATTACTGAGGGAATTGATGCTGAGAAACAAAATGCTATGCTGGCTTGGTTCCTTTCTTGA 1065 0.4685 MGRAPCCEKVGLKKGRWTAQEDEILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADIKRGNISAQEEEIIIKLHASVGNRKIYAFRRPASMDQTQPVVTMETHMPKANSVPTKRKGGRTSRWAMKKNRSVTQKAAERPEETSVSVPNQNNIVAVPVPPTPALENEGLSIADDAIELEDFMVLEGDTEMAYEVVEGSVLRGDGDKETETLQGCQEGIDGGGVLSFNDMVDTCLLEEGGGGVLNISGEGIEGENTCADNKMATSDQEIENGTNGKITEEWHSSAFEHDYWDIWESSVEQSKPNEWESWEDKQNLLSWLWEDDDWESDCQITEGIDAEKQNAMLAWFLS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0498 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Dere02g0498 354 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Dere02g0498 354 SUPERFAMILY Homeodomain-like 15 88 IPR009057 -
Dere02g0498 354 Gene3D - 13 66 - -
Dere02g0498 354 CDD SANT 16 61 IPR001005 -
Dere02g0498 354 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 141 - -
Dere02g0498 354 SMART sant 13 63 IPR001005 -
Dere02g0498 354 MobiDBLite consensus disorder prediction 114 152 - -
Dere02g0498 354 FunFam Myb transcription factor 11 67 - -
Dere02g0498 354 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0498 Dere-ChrDere02 4844132 4846318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0498 1 354 MYB Transcription Factor Family AT3G62610 36.702 6.76e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere02g0498 Myb_DNA-binding 6.5e-12 CL0123