Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0481 ATGGCCTCTATTCAACGCACGGCAAGTTCGGGATCCGAAGGGGGAGACCCAAGATATGCTGTGATCGATGAGAAGAAGAGGAAGAGGATGCTGTCCAACCGCGAATCAGCGCGGCGGTCCCGGATGAGGAAGCATAAGCAAATGGAAGATCTAACCAATGAAATCAGCCGATTGCAAAGTGAAAACTGCCAGCTATATCAGAGCATAAAGACTAAGGAGGAAGTATACATTGAGATCGAATCCGTTAACAATATCTTGAGAGCTCAGACTACGGAGTTGACCGATCGATTGCGCTCTCTGAACTCGATCCTTGAGATCGCTGAAGAGGTCATCGGGCTTTCTGTCGAAATCCCTGAGATACCAGATACTCTACTGAACCCATGGCAGCTTCCTCTTCCAATGCTGCCGATCATGGCGTCCGCAGACTTGGTTCTGCATTGA 441 0.4921 MASIQRTASSGSEGGDPRYAVIDEKKRKRMLSNRESARRSRMRKHKQMEDLTNEISRLQSENCQLYQSIKTKEEVYIEIESVNNILRAQTTELTDRLRSLNSILEIAEEVIGLSVEIPEIPDTLLNPWQLPLPMLPIMASADLVLH 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0481 146 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Dere02g0481 146 Pfam Basic region leucine zipper 23 71 IPR004827 GO:0003700|GO:0006355
Dere02g0481 146 Coils Coil 34 61 - -
Dere02g0481 146 MobiDBLite consensus disorder prediction 1 49 - -
Dere02g0481 146 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
Dere02g0481 146 SUPERFAMILY Leucine zipper domain 25 75 IPR046347 GO:0003700|GO:0006355
Dere02g0481 146 CDD bZIP_plant_GBF1 26 69 IPR045314 GO:0003700|GO:0006355
Dere02g0481 146 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 70 IPR004827 GO:0003700|GO:0006355
Dere02g0481 146 Gene3D - 23 78 - -
Dere02g0481 146 PANTHER BZIP TRANSCRIPTION FACTOR 44 6 140 - -
Dere02g0481 146 FunFam BZIP transcription factor 23 74 - -
Dere02g0481 146 MobiDBLite consensus disorder prediction 18 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0481 Dere-ChrDere02 4740963 4741403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0481 1 144 bZIP Transcription Factor Family AT3G62420 57.931 1.05e-56 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere02g0481 bZIP_2 1.5e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3489 01 49351784 49352224 Dere02g0481 02 4740963 4741403 CCT