Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0475 ATGGCATTTGAGGAACATGGGTTAACTGAGGAAGTATTGGATATTGTGAGCCAGTCAGTTGGAGGTACTATGCAGGAAATCCAGGATAGGTACAAAAGTCTCAAGGAAAAAAATATGGGGAGGCAGGACCACCATTCTGAAAGTTCTGGAGATTATGAATCTCGTATTGGCATATCTTTGGAGAAAAGCTTGAGTGCTGCTTTAGATTCTTTTGATAACCTTTTTTGTCGCCGGTGCATGATGTTTGATTGTCATTTGCATGGATGTTCTCAACCCCTAATATATCCTAGTGAAAAGCTGCCAGTTTGGTTTGAACCTGAAGAGGGCAGGAAGCCATGTAGTGATCAGTGTTACCTTAAGTTAAGGGCTGTGAAATTTCCATCAGATTCTAGGTCGTTGCAGGGTAATAAAACCACAATTGTGGAAGAGGGAGAATTGACATTCGCACTCTCTGGCGCAGAAGAGCCAGGAAACCAGAGTATTGTAACTATCTTGATGGAAGAAAGATGCAATTCTAAGAATTCAACACCTTGTCCAACAGAAGTTGCTAGTAGTGGAGGTCTCAACTTAAATATGCCTGTTGCAGAATGTCTGGGTAAACGGAAGGTCACAAATCAGTCAGACATTGCACTGTGTGACTCACCCTTGCTTCCTGATGATTCACAGAGTTCTTCTAAAAGGCAAAAGAAAGTCACAGATACTGATGTAGTTACTGCAATTAGTGATTATAACAGGGACCTAAATGTTGGTGCATGTGATGAAAGCAAATGCATTATTGATTCTGAGTGTTTAAACGATTCTGTAGAGCATATTTCTAGTAAGTTAATATTTTCTGGGAGCACTTGTCATGGTGAACATGAAAATGCTATGGATGGACCAAAAGATGTCACAGCTGATGCAGAACTGAAGCAGTCATCCAATTTGATGGAAGAGCATGTTGAAGGGATGCAAAGTCTCTCAGAATGGAAACCTCTGGAGAAAGAACTATACTTGAAGGGAGTAGAAATGTTTGGGAGAAACAGTTGCCTCATAACAAGGAACTTACTTTCTGGCTTGAAGACTTGCATAGAAGTAGCCAGTTACATGCATGCTGGTGGAGCGTCAATTCCCCACCGATATAATGTTGCACCAAGTTCACTCAGGGATGACAATGGAAAAACTGATGCTGAATGCACAGACCAAGAGATGCCCACAAGAGCACGGTTGCTGCGGAAAAGGGGCAAGACAAGGAAATTTAAATATTCTTGGAAGTCTGCTGGCCACCCATCTATATGGAAAAGAATTGCAGATGGGAAAAACCAATCTTGCAAGCAATATACACCCTGTGGATGTCAGTCAATGTGTGGAAAGCAATGTCCATGTCTTCATAATGGAACCTGCTGTGAAAAATATTGCGGGTGTTCCAAAAGCTGCAAAAATAGATTCAGGGGATGCCATTGTGCTAAGAGTCAATGCAGAAGTCGACAATGCCCATGCTTTGCTGCTGGACGTGAATGTGATCCAGATGTTTGTCGTAATTGCTGGGTTAGTTGCGGCGATGGTTCATTAGGGGAGCCACCTAAACGTGGAGATGGTCAATGTGGAAATATGAGACTCCTTTTGAGGCAACAACAGAGGATTCTTTTGGCAAAGTCTGATGTCGCAGGATGGGGAGCCTTCTTAAAGAACCCAGTTAACAAAAATGATTACTTAGGAGAATACACAGGGGAATTGATCTCCCACCGAGAAGCAGATAAGCGTGGAAAAATATATGATCGTGCAAACTCATCATTCCTTTTTGACTTGAATGATCAGTATGTTCTTGATGCTTATCGCAAAGGAGACAAACTAAAATTTGCTAACCACTCGTCAAATCCAAACTGCTATGCAAAGGTGATGCTGGTTGCTGGGGATCATCGAGTAGGTATATTTGCCAAGGAACGCATTGAAGCTAGTGAGGAGCTGTTCTATGATTATCGTTATGGTCCAGATCAAGCGCCCGCTTGGGCTCGAAAACCTGAGTCTTCCAAGAGAGATGAATCGGCAGTTTCTCAAGGCAGAGCTAAGAAACATCAGTCTCATTGA 2064 0.4244 MAFEEHGLTEEVLDIVSQSVGGTMQEIQDRYKSLKEKNMGRQDHHSESSGDYESRIGISLEKSLSAALDSFDNLFCRRCMMFDCHLHGCSQPLIYPSEKLPVWFEPEEGRKPCSDQCYLKLRAVKFPSDSRSLQGNKTTIVEEGELTFALSGAEEPGNQSIVTILMEERCNSKNSTPCPTEVASSGGLNLNMPVAECLGKRKVTNQSDIALCDSPLLPDDSQSSSKRQKKVTDTDVVTAISDYNRDLNVGACDESKCIIDSECLNDSVEHISSKLIFSGSTCHGEHENAMDGPKDVTADAELKQSSNLMEEHVEGMQSLSEWKPLEKELYLKGVEMFGRNSCLITRNLLSGLKTCIEVASYMHAGGASIPHRYNVAPSSLRDDNGKTDAECTDQEMPTRARLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKERIEASEELFYDYRYGPDQAPAWARKPESSKRDESAVSQGRAKKHQSH 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0475 687 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 687 IPR025778 GO:0031519
Dere02g0475 687 ProSiteProfiles CXC domain profile. 425 524 IPR026489 -
Dere02g0475 687 MobiDBLite consensus disorder prediction 659 687 - -
Dere02g0475 687 SUPERFAMILY SET domain 409 658 IPR046341 -
Dere02g0475 687 FunFam Putative histone-lysine N-methyltransferase EZH2 439 655 - -
Dere02g0475 687 Pfam SET domain 549 652 IPR001214 GO:0005515
Dere02g0475 687 Pfam CXC domain 477 508 IPR041355 -
Dere02g0475 687 ProSiteProfiles SET domain profile. 538 653 IPR001214 GO:0005515
Dere02g0475 687 SMART CXC_2 473 510 IPR033467 -
Dere02g0475 687 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 1 686 IPR045318 GO:0006338|GO:0042054
Dere02g0475 687 SMART set_7 538 659 IPR001214 GO:0005515
Dere02g0475 687 Gene3D SET domain 439 655 IPR046341 -
Dere02g0475 687 CDD SET_EZH 538 654 - -
Dere02g0475 687 MobiDBLite consensus disorder prediction 664 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0475 Dere-ChrDere02 4695341 4701164 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0475 527 656 C2H2 Transcription Factor Family AT2G23740 26.531 2.95e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dere02g0475 SET 7.7e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g0475 02 4695341 4701164 Dere02g0475 02 4695341 4701164 ECH