Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0473 ATGAGTAATGATCCTCTTTCTTTCACAGCTTTCAATTTCAATGGAGTCCAGGATGGTTTTGTTTCTGTGCAAGAGGAGGATGTGTTCAATGGGAAATTAATTTTCCCAGGCATGAAATTTCAGGAAGAGATCACATCTCTCCCAGCTGAAAATCATGAGAAAGAAGCCCATCTGTTTGAAAATCATGATCAAGAACCCAAATTTGATGACTTGATGTTGGAAGAGTTGAGCTTTGACCCTCTTCTGCAAACATCACAACCATTTCAGGAAACTACAGAGCTGAAGAATCACGGAGTGGCAAGTTCGGAACCTGTTCAATACAATAATAAGCCAGTTATTCCAATCTCTTCAATTTTCGCATCCTTGGAGCTTCTAAGCAATTATAGAAGTAGGCTCAAGAGACCAAATGGGCAAAATATTGGCAACACAATCAATATTGAAAGTTCAGTGGGTCGCCAGAAGTTGTCAACTGAGGATATAATAAGAGTGGCTGGAGAAAGGTATGTCCAATTCTCTACCCATTGGTCCGATGATAAATGCATCCCTATGTACCCGTATGCGTTTGGTCTTGGTAGTCTGTCCCAGGAAGAAAACAGAGACGTTGAACTTGCTCAGTTTCTTCTGAGTGCCGCTGAGAAGGTAGGCTTGGAACAATTCGAACGAGCAAGTAGATTACTTTTACACTGTCAATTGTATTCATCTGCTTGTGCAACCCCAATTCAGAAAGTCATCTTCTATTTCGCTCAAGCACTACTGGAGAGAATCGCCAAAGAAATAAGAATGACAACAACATTTAATGGATCAGAGAAAAACGAAGAACATGAATCAATTCAGAAGATGGATTTAAACGTACCCTTTATGTTTGTGTATCATAAGAAGGTCCCTTTCAGTCAAGTAATGCAATTAACTGGTGTACAAACTATAGTGGAGCACGTTGCGTCAGAGACGAAAATCCATCTGATTGATCTTAATATCAGATGTGGGGTGCAATGGACGGCTCTGATGCAAGCACTAACCGAGCGCCATGAAAGGCCAGTAGAGCTTTTCAAGATAACTGCTATTGGATTTAGAGGCAATACCAAGTTAGAAGAGACAGGCGAGTGTTTAGCCAGCTTTGCGATATCCTTGAACTTGCCCTTCTCATTTAAGACAATTTTTGTTACAGACATGATGGAAATAAAGGTTGATCAGTTTGAGATCAACAATGATGAAGCTGTAGTTGTCTACGCTCCCTATGTTCTGATGACAATGGTGTCAAGGACTGAGTGCTTGGAAAACTTGATGGGGACAATAAGAAATATGAAACCACGTCTAATGATAGTGCTTGAATCGGAAGCAAATCATAACTCGCCCTCCTTTGCGAAGCGTTTTGTTGAGGCTTTATTCTTCTTCTCGGCACATATGGATTGCCTTGAAACATGCATGAAGGAGGATGGCGAGAACAGAGAGACAATCGAAGCATTATTGGGTAAAGCGATCAGAAACATTGTGGCTATGGAAGGCCAAGAAAGGACAGTGAGGAATGTGAAGATAGATATCTGGAGAAGGTTCTTTGCGAGGTACAGATTGATGGAGACAGAGTTTAGTGAATCATCTCTGTACCAAGCTAACTTGGTCCTCAAAAAATTTGTTTGTGGGAATCTTTGCAATCTTGATAAAAATGGCAAGAGTCTAACAATGGGGTGGAAGGGGACCCCGCTCCACTCCCTTTCAGCTTGGACGTTTCTTTCAGAATACAAGTGA 1743 0.4125 MSNDPLSFTAFNFNGVQDGFVSVQEEDVFNGKLIFPGMKFQEEITSLPAENHEKEAHLFENHDQEPKFDDLMLEELSFDPLLQTSQPFQETTELKNHGVASSEPVQYNNKPVIPISSIFASLELLSNYRSRLKRPNGQNIGNTINIESSVGRQKLSTEDIIRVAGERYVQFSTHWSDDKCIPMYPYAFGLGSLSQEENRDVELAQFLLSAAEKVGLEQFERASRLLLHCQLYSSACATPIQKVIFYFAQALLERIAKEIRMTTTFNGSEKNEEHESIQKMDLNVPFMFVYHKKVPFSQVMQLTGVQTIVEHVASETKIHLIDLNIRCGVQWTALMQALTERHERPVELFKITAIGFRGNTKLEETGECLASFAISLNLPFSFKTIFVTDMMEIKVDQFEINNDEAVVVYAPYVLMTMVSRTECLENLMGTIRNMKPRLMIVLESEANHNSPSFAKRFVEALFFFSAHMDCLETCMKEDGENRETIEALLGKAIRNIVAMEGQERTVRNVKIDIWRRFFARYRLMETEFSESSLYQANLVLKKFVCGNLCNLDKNGKSLTMGWKGTPLHSLSAWTFLSEYK 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0473 580 Pfam GRAS domain family 204 574 IPR005202 -
Dere02g0473 580 ProSiteProfiles GRAS family profile. 194 574 IPR005202 -
Dere02g0473 580 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 150 567 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0473 Dere-ChrDere02 4682505 4684247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0473 172 580 GRAS Transcription Factor Family AT5G17490 30.048 4.73e-51 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere02g0473 GRAS 7.2e-82 CL0063