Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0471 ATGTTGAAGAGGTTTTGGCAAGAGACACTCAGCAAGGATATATCCACTTCTGTTCTTGATCCACTTCTTCTCATTACCTCTGCAAACTCACCTTCTGTTAGAACTCTACATCTTTCTTCCTTTCAGCCAAGACAAAGAAAAAGGAAGCGATCATACGTAACAATGGATGGTACAACCTCCCCGAAACTTGAGCCAGAAGCATCTCCAGGGCTCAAACCAGAAATTCAAGAGTCCAAAAAGCGGAAAATGGTTCAGAAAACAGTTGTGACGGTGAGAATAGGAGAAAATGTTAGCAAACTGAAGAATGAAGGGCTACCATCAGACTCGTGGTCTTGGAGGAAATATGGACAAAAGCCTATTAAAGGATCTCCTTATCCAAGGGGCTATTACAAGTGCAGCACATCCAAAGGTTGTTCAGCTAAAAAGCAAGTAGAGAGATGCAGAACAGATGCTTCAATGCTCATTGTCACCTACACTTCTACCCATAACCATCCAGCTCCTGATTTACCCTCCACCGTTCAACAATTCAAAGAATCCCAAACCCAAACCACTGAAGATCTCCCACCTGCTACCTTCAAGGTGGAAGACCAAGAACAAGAGGAACAGAAGGAAGATCTTAAACTTGCTATCACAAGCGATCAACGTGCATATGAAGAAAATTTTCATTACTTACAGTCGCCGATAGGCTGTTCTGAGGACATTATTATTGACCAAGAGGATCCTTTCAAATTGAACTCGGAGAAAACCCATGACAGGATAGATCTTCTCTTAGAGGAAGAGCCCCTCTGTTATTCTCAGCACATGAACCTCTCGACACTCAAATCGGAAGAACTTGACTTTTTCGACGAGCTTGAAGAGCTACCCATGTCTTCGTCTTTGTTGAACTTGATGAGGAGAACTTTTTCCGATGAAAGGATTCCTGTTGCCCCTTCTTGA 936 0.4284 MLKRFWQETLSKDISTSVLDPLLLITSANSPSVRTLHLSSFQPRQRKRKRSYVTMDGTTSPKLEPEASPGLKPEIQESKKRKMVQKTVVTVRIGENVSKLKNEGLPSDSWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDASMLIVTYTSTHNHPAPDLPSTVQQFKESQTQTTEDLPPATFKVEDQEQEEQKEDLKLAITSDQRAYEENFHYLQSPIGCSEDIIIDQEDPFKLNSEKTHDRIDLLLEEEPLCYSQHMNLSTLKSEELDFFDELEELPMSSSLLNLMRRTFSDERIPVAPS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0471 311 SMART WRKY_cls 106 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g0471 311 ProSiteProfiles WRKY domain profile. 101 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g0471 311 MobiDBLite consensus disorder prediction 39 71 - -
Dere02g0471 311 Gene3D WRKY domain 92 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere02g0471 311 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 51 292 IPR044810 GO:0003700
Dere02g0471 311 FunFam WRKY transcription factor 65 90 167 - -
Dere02g0471 311 Pfam WRKY DNA -binding domain 108 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere02g0471 311 SUPERFAMILY WRKY DNA-binding domain 103 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0471 Dere-ChrDere02 4667136 4668629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0471 42 293 WRKY Transcription Factor Family AT4G01250 36.905 1.47e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere02g0471 WRKY 2.9e-24 CL0274