Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0466 ATGTCGGTGCTTCCAGTTTCTATCTCAATCGGTGCCTTGAAAAACATACAACATTTGTTGCTGAAATGGTTGCTTGTACTATCTTGCTTGGTATTTATGGCTGATTCTAATGCATTTGATAAAATAATGGAGCCTCCATCATTATCTCCAGCTAGACCGCCTTCGGCTGCTATAGTAGTTCGTGATCTGCCACAACCAGCAAATCTCCATGGGCGGAAGCATCCCCCTTCCCATGGTGGTTCAATTCCAACATTGTCACCAGCCCATCCTCCTTCGTATGGTCCATTTGTAAGTGCTGGTCACCCCCCTGCAAGTTCACGATTATCTAAACCATCAATGAAGAGGAGTGAATTAGGACCTCAAGTTCCTGGCTTTGGAGATATTGCCCCTATGCATTCTACTGCTGGTGCAATTCCTTCTGGTTTGGCTCAGCCGCCATTGTCCCCTTATGTTTCCAATTGTTGTAAACAAGACATGGTGTTGAAGCGAGGGAGTAACAGTTGCCACTGTGTGTATCCCATAAAACTAGACCTTCTCCTTTTGAATGTCTCTCAAAGCTCTAACTGGAATCTTTTTCTCAATGAATTGGCTACCCAACTTGGGCTGCAAACTACCCAGATTGAACTGATAAATTTTTATGTACTGAGCTTATCAACATTAAATATATCAATGGATATCACTCCACATAAAGGGATCAGTTTCTCTGCCATTGAAGCATCTAAAATAAACTCTTCGCTTTCAATGCATAAGATTCAACTAGACCCTAGATTAGTGGGTGACTACAAGCTTCTCAATATGACATGGTTTGAGCCTCCACCTCCATCTCAAGCTCCTACTTTTGCCGCATCACCTATGAAAGCTCCTATATACCATACACCAGCAGCTACATCACCGAGTACTTCAAATAGGGGAAGGCATTCAAACTTGTATCCTATTATTGGAATTGGTGCTGGTATACTCTTCATTGCCATCATATGTCTGCTTGTACTTTGTTTATGCACATTGAGGCCAAAGACCAAAAGACCTCCCATACATACTGAAAAGCCAAGGACTGAAGGTGCAGTTTCAGCTGCTGCGTCTTTTCCTCACCCAACCAGTACAAGATTTATTGCTTATGAAGAACTTAAAGAAGCAACAAACAACTTTGAAGCAGCAAGCATACTTGGAGAAGGCGGGTTTGGTAGAGTTTTTAAAGGTGTCTTAAATGATGGTACTGCTGTAGCAATTAAGAGACTTACTAATGGAGGGCAACAGGGGGACAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGTCGGTTGCATCATCGTAATCTTGTAAAACTAGTGGGATACTATAGCAACCGTGACTCATCACAAAATCTACTATGCTATGAGCTTGTCCCAAATGGAAGTTTGGAAGCTTGGCTTCATGGTCCCTTGGGAATAAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCGCTTGATGCTGCAAGAGGACTTGCATACCTGCATGAAGACTCACAGCCTTGCGTTATACACAGAGATTTCAAGGCGTCCAACATATTGCTTGAAAACAACTTTCATGCTAAAGTTGCAGATTTTGGTCTTGCTAAACAGGCACCTGAAGGCAGAGCCAATTACCTGTCTACTCGTGTCATGGGCACATTTGGGTATGTTGCTCCTGAGTATGCCATGACTGGTCACCTTCTTGTTAAAAGTGATGTTTATAGCTATGGGGTTGTCTTGCTGGAACTGCTGACTGGAAGGAAACCTGTGGATATGTCACAGCCAGCTGGACAAGAGAACCTGGTTACTTGGGCAAGGCCAATCCTTAGAGATAAGGACCGATTGGAAGAGCTTGCTGATCCAAGGCTGGGGGGAAAGTATCCAAAGGAAGATTTTGTCCGTGTTTGTACTATTGCTGCAGCCTGTGTCGCTCCTGAAGCAAGCCAACGACCCACAATGGGTGAAGTGGTCCAGTCACTTAAAATGGTGCAGCGCATGACAGAATATCAGTGTTCCATGGTGCCATCCTCCAATACACGGACTAACCTAAGACAGTCCTCTACCACTTTCGAGTCTGATGGGACATCTTCTATGTTCTCTTCGGGTCCCTACTCTGGTCTAAGTGTCTTTGAAAATGACAACATTAATAGGACAGCAGTTTTCTCTGAAGATCTCCATGAAGGAAGGTGA 2181 0.4374 MSVLPVSISIGALKNIQHLLLKWLLVLSCLVFMADSNAFDKIMEPPSLSPARPPSAAIVVRDLPQPANLHGRKHPPSHGGSIPTLSPAHPPSYGPFVSAGHPPASSRLSKPSMKRSELGPQVPGFGDIAPMHSTAGAIPSGLAQPPLSPYVSNCCKQDMVLKRGSNSCHCVYPIKLDLLLLNVSQSSNWNLFLNELATQLGLQTTQIELINFYVLSLSTLNISMDITPHKGISFSAIEASKINSSLSMHKIQLDPRLVGDYKLLNMTWFEPPPPSQAPTFAASPMKAPIYHTPAATSPSTSNRGRHSNLYPIIGIGAGILFIAIICLLVLCLCTLRPKTKRPPIHTEKPRTEGAVSAAASFPHPTSTRFIAYEELKEATNNFEAASILGEGGFGRVFKGVLNDGTAVAIKRLTNGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPAGQENLVTWARPILRDKDRLEELADPRLGGKYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRMTEYQCSMVPSSNTRTNLRQSSTTFESDGTSSMFSSGPYSGLSVFENDNINRTAVFSEDLHEGR 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0466 726 ProSitePatterns Protein kinases ATP-binding region signature. 388 410 IPR017441 GO:0005524
Dere02g0466 726 MobiDBLite consensus disorder prediction 66 85 - -
Dere02g0466 726 SUPERFAMILY Protein kinase-like (PK-like) 360 659 IPR011009 -
Dere02g0466 726 PANTHER OS01G0750732 PROTEIN 152 684 - -
Dere02g0466 726 Gene3D Phosphorylase Kinase; domain 1 346 459 - -
Dere02g0466 726 FunFam Receptor-like serine/threonine-protein kinase ALE2 460 676 - -
Dere02g0466 726 ProSiteProfiles Protein kinase domain profile. 382 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g0466 726 MobiDBLite consensus disorder prediction 672 694 - -
Dere02g0466 726 MobiDBLite consensus disorder prediction 93 117 - -
Dere02g0466 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Dere02g0466 726 FunFam Receptor-like serine/threonine-protein kinase ALE2 362 459 - -
Dere02g0466 726 CDD STKc_IRAK 388 658 - -
Dere02g0466 726 Pfam Protein tyrosine and serine/threonine kinase 385 657 IPR001245 GO:0004672|GO:0006468
Dere02g0466 726 Gene3D Transferase(Phosphotransferase) domain 1 460 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0466 Dere-ChrDere02 4629769 4635616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0466 1 726 Receptor kinase-like Gene Family AT4G02010 68.852 0.0 1003
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Dere02g0466 Pkinase 1.8e-44 CL0016