Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0452 ATGGGGGCTTCTTCACAGTCTTTCCCTGTTTCCCTGTCTTTGAGAAATCTGCTTCGGGCAGCTGAAGAAGACAGGAATTCATCATATGGGTATTTGTGGAGCAAAGTGTTGGCAGCACATGGCATGAAGCAGAAGGTGTGGAAGAAGAATAGTGGGAAAAGGAGGACGCCAAGAAGGATTTTAATGAAGAGGAGGGCACGCTCGATAGAAGGTTCTAGAAGACGAGCCATGGGGATTAAGACGAGAGTCAGAACATTGAAGAGGCTTATACCCAACAGCGAGTCCATGGGGTTGGAGGGGCTCTTCGGACAGACAGCTGAATACATTTTGTCATTACAAATGAGAGTGAGAGCCATGCAGATTATGGTTAACGTATTGACAGGTATAGAAGATCGCTTTTGGATGTCCAACATATGTTTACTTTCGTGTTGCCTAGATTTAGAACAGCAAGGGTATCATTTCAGTGTGTCACTGCAGCCAAAAGATGAAGCCAATGCTAGTTTATTACGATTCTTTCTGTAA 522 0.4444 MGASSQSFPVSLSLRNLLRAAEEDRNSSYGYLWSKVLAAHGMKQKVWKKNSGKRRTPRRILMKRRARSIEGSRRRAMGIKTRVRTLKRLIPNSESMGLEGLFGQTAEYILSLQMRVRAMQIMVNVLTGIEDRFWMSNICLLSCCLDLEQQGYHFSVSLQPKDEANASLLRFFL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0452 173 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 63 112 IPR011598 GO:0046983
Dere02g0452 173 CDD bHLH_AtIBH1_like 70 123 IPR044549 GO:0006355
Dere02g0452 173 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 64 127 IPR036638 GO:0046983
Dere02g0452 173 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 27 126 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0452 Dere-ChrDere02 4519088 4519688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0452 43 127 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 46.067 9.48e-19 75.1